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Stable expression of small interfering RNA sensitizes TEL-PDGFβR to inhibition with imatinib or rapamycin
Jing Chen, Nathan R. Wall, Kerry Kocher, Nicole Duclos, Doriano Fabbro, Donna Neuberg, James D. Griffin, Yang Shi, D. Gary Gilliland
Jing Chen, Nathan R. Wall, Kerry Kocher, Nicole Duclos, Doriano Fabbro, Donna Neuberg, James D. Griffin, Yang Shi, D. Gary Gilliland
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Article Hematology

Stable expression of small interfering RNA sensitizes TEL-PDGFβR to inhibition with imatinib or rapamycin

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Abstract

Small molecule inhibitors, such as imatinib, are effective therapies for tyrosine kinase fusions BCR-ABL–TEL-PDGFβR–mediated human leukemias, but resistance may develop. The unique fusion junctions of these molecules are attractive candidates for molecularly targeted therapeutic intervention using RNA interference (RNAi), which is mediated by small interfering RNA (siRNA). We developed a retroviral system for stable expression of siRNA directed to the unique fusion junction sequence of TEL-PDGFβR in transformed hematopoietic cells. Stable expression of the siRNA resulted in approximately 90% inhibition of TEL-PDGFβR expression and its downstream effectors, including PI3K and mammalian target of rapamycin (mTOR). Expression of TEL-PDGFβR–specific siRNA (TPsiRNA) significantly attenuated the proliferation of TEL-PDGFβR–transformed Ba/F3 cells or disease latency and penetrance in mice induced by intravenous injection of these Ba/F3 cells. Although a 90% reduction in TEL-PDGFβR expression was insufficient to induce cell death, stable siRNA expression sensitized transformed cells to the PDGFβR inhibitor imatinib or to the mTOR inhibitor rapamycin. TPsiRNA also inhibited an imatinib-resistant TEL-PDGFβR mutant, and the inhibition was enhanced by siRNA in combination with PKC412, another PDGFβR inhibitor. Although siRNA delivery in vivo is a challenging problem, stable expression of siRNA, which targets oncogenic fusion genes, may potentiate the effects of conventional therapy for hematologic malignancies.

Authors

Jing Chen, Nathan R. Wall, Kerry Kocher, Nicole Duclos, Doriano Fabbro, Donna Neuberg, James D. Griffin, Yang Shi, D. Gary Gilliland

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Stable siRNA expression sensitizes TEL-PDGFβR for small molecule inhibit...
Stable siRNA expression sensitizes TEL-PDGFβR for small molecule inhibitors and overcomes drug resistance. (A) TPsiRNA expression sensitizes TEL-PDGFβR_transformed Ba/F3 cells to inhibition by imatinib in a cell viability assay. The percentage of cell growth was normalized to the growth of cells in the absence of drug treatment. (B) TPsiRNA sensitizes TEL-PDGFβR to inhibition by imatinib in auto-tyrosine phosphorylation and activation of TEL-PDGFβR downstream signaling components. Western blot analysis was performed as described in Figure 2. (C) TPsiRNA sensitizes TEL-PDGFβR_transformed Ba/F3 cells to the effects of mTOR inhibitor rapamycin in the cell viability assay. (D) Activation of mTOR assessed by phosphorylation of the mTOR target p70 S6 kinase. Ba/F3 cells transduced with empty retroviral vector were included as a control. (E) Schematic representation of NPM-ALK fusion tyrosine kinase. The fusion junction that the siRNA was designed to target is indicated in the upper panel. The lower panel shows the predicted short hairpin transcript with a 3′_U5 pol III stop signal. (F) NPM-ALK_specific siRNA (NAsiRNA) sensitizes Ba/F3 cells transformed with NPM-ALK (N/A) to rapamycin in the cell viability assay. (G) Decreased expression of NPM-ALK and phosphorylation of p70 S6 kinase by stable expression of NAsiRNA. Ba/F3 cells transduced with empty retroviral vector were included as a control.

Copyright © 2026 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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