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Virus-associated inflammation imprints an inflammatory profile on monocyte-derived macrophages in the human liver
Juan Diego Sanchez Vasquez, … , Harry L.A. Janssen, Adam J. Gehring
Juan Diego Sanchez Vasquez, … , Harry L.A. Janssen, Adam J. Gehring
Published April 15, 2025
Citation Information: J Clin Invest. 2025;135(8):e175241. https://doi.org/10.1172/JCI175241.
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Research Article Hepatology Immunology Infectious disease

Virus-associated inflammation imprints an inflammatory profile on monocyte-derived macrophages in the human liver

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Abstract

Chronic liver injury triggers the activation and recruitment of immune cells, causing antigen-independent tissue damage and liver disease progression. Tissue inflammation can reshape macrophage composition through monocyte replacement. Replacement of tissue macrophages with monocytes differentiating in an inflammatory environment can potentially imprint a phenotype that switches the liver from an immune-tolerant organ to one predisposed to tissue damage. We longitudinally sampled the liver of patients with chronic hepatitis B who had active liver inflammation and were starting antiviral therapy. Antiviral therapy suppressed viral replication and liver inflammation, which coincided with decreased myeloid activation markers. Single-cell RNA-Seq mapped peripheral inflammatory markers to a monocyte-derived macrophage population, distinct from Kupffer cells, with an inflammatory transcriptional profile. The inflammatory macrophages (iMacs) differentiated from blood monocytes and were unique from macrophage found in healthy or cirrhotic liver. iMacs retained their core transcriptional signature after inflammation resolved, indicating inflammation-mediated remodeling of the macrophage population in the human liver that may affect progressive liver disease and immunotherapy.

Authors

Juan Diego Sanchez Vasquez, Shirin Nkongolo, Daniel Traum, Valentin Sotov, Samuel C. Kim, Deeqa Mahamed, Aman Mehrotra, Anjali Patel, Diana Y. Chen, Scott Fung, Anuj Gaggar, Jordan J. Feld, Kyong-Mi Chang, Jeffrey J. Wallin, Ben X. Wang, Harry L.A. Janssen, Adam J. Gehring

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Figure 4

Analysis of monocyte/macrophage differentiation trajectories during liver inflammation in patients with CHB before antiviral treatment.

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Analysis of monocyte/macrophage differentiation trajectories during live...
(A) iMacs, both CD14+ monocytes and CD16+ monocytes, were reclustered using Seurat during liver inflammation using UMAP dimensionality reduction. (B) Violin plots of CD14+ monocyte–defining genes. All selected genes have an adjusted P value of less than 0.05. (C) Enrichment plot from pathway analysis done on CD14+ monocytes at baseline versus week 24 of TAF treatment. Each vertical line represents a differentially expressed gene belonging to the pathway. (D) Genes with differential expression between clusters were used to generate hypothetical developmental relationships using the Monocle algorithm. (E) Individual clusters along the Monocle trajectory. (F) Gene expression of CD14+ monocyte–defining (first row), iMac-defining (second row), differentiation-defining (third row), and CD16+ monocyte–defining (fourth row) genes along the pseudotime trajectory.

Copyright © 2025 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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