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Targeting lysine demethylase 6B ameliorates ASXL1 truncation–mediated myeloid malignancies in preclinical models
Guo Ge, … , Mingjiang Xu, Feng-Chun Yang
Guo Ge, … , Mingjiang Xu, Feng-Chun Yang
Published November 2, 2023
Citation Information: J Clin Invest. 2024;134(1):e163964. https://doi.org/10.1172/JCI163964.
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Research Article Hematology

Targeting lysine demethylase 6B ameliorates ASXL1 truncation–mediated myeloid malignancies in preclinical models

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Abstract

ASXL1 mutation frequently occurs in all forms of myeloid malignancies and is associated with aggressive disease and poor prognosis. ASXL1 recruits Polycomb repressive complex 2 (PRC2) to specific gene loci to repress transcription through trimethylation of histone H3 on lysine 27 (H3K27me3). ASXL1 alterations reduce H3K27me3 levels, which results in leukemogenic gene expression and the development of myeloid malignancies. Standard therapies for myeloid malignancies have limited efficacy when mutated ASXL1 is present. We discovered upregulation of lysine demethylase 6B (KDM6B), a demethylase for H3K27me3, in ASXL1-mutant leukemic cells, which further reduces H3K27me3 levels and facilitates myeloid transformation. Here, we demonstrated that heterozygous deletion of Kdm6b restored H3K27me3 levels and normalized dysregulated gene expression in Asxl1Y588XTg hematopoietic stem/progenitor cells (HSPCs). Furthermore, heterozygous deletion of Kdm6b decreased the HSPC pool, restored their self-renewal capacity, prevented biased myeloid differentiation, and abrogated progression to myeloid malignancies in Asxl1Y588XTg mice. Importantly, administration of GSK-J4, a KDM6B inhibitor, not only restored H3K27me3 levels but also reduced the disease burden in NSG mice xenografted with human ASXL1-mutant leukemic cells in vivo. This preclinical finding provides compelling evidence that targeting KDM6B may be a therapeutic strategy for myeloid malignancies with ASXL1 mutations.

Authors

Guo Ge, Peng Zhang, Pinpin Sui, Shi Chen, Hui Yang, Ying Guo, Ivan P. Rubalcava, Asra Noor, Caroline R. Delma, Joel Agosto-Peña, Hui Geng, Edward A. Medina, Ying Liang, Stephen D. Nimer, Ruben Mesa, Omar Abdel-Wahab, Mingjiang Xu, Feng-Chun Yang

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Figure 4

Heterozygous deletion of Kdm6b decreases ASXL1aa1–587–mediated transcription activation in HSPCs.

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Heterozygous deletion of Kdm6b decreases ASXL1aa1–587–mediated transcrip...
(A) Heatmap displaying gene expression for all genes differentially expressed in LK cells from each mutant genotype relative to WT controls (FDR < 0.05 and |fold change| > 1.5, n = 3 mice per genotype). (B) Venn diagram showing the overlap of dysregulated genes in Asxl1Y588XTg LK cells (compared with WT cells) and Asxl1Y588XTg Kdm6bΔ/+ cells (compared with Asxl1Y588XTg cells). (C) GSEA with NES and FDR values for gene sets of HSC, LSC and AML, and PRC2 in Asxl1Y588XTg LK cells. The colors reflect scaled NES, representing the degree of expression change. Sizes of circles represent the FDR value. (D) GSEA plots show that genes involved in the regulation of HSC, LSC, and PRC2 targets are upregulated in Asxl1Y588XTg LK cells, but downregulated in Asxl1Y588XTg Kdm6bΔ/+ cells. NES, P value, and FDR are shown. (E) qPCR verified the change in mRNA levels of Gata2 and Meis1 (n = 3 mice per genotype). Data represent the mean ± SEM. *P < 0.05 and **P < 0.01, by 1-way ANOVA with Tukey’s multiple-comparison test.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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