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Primary cilia formation requires the Leigh syndrome–associated mitochondrial protein NDUFAF2
Chien-Hui Lo, … , Y. Joyce Liao, Yang Sun
Chien-Hui Lo, … , Y. Joyce Liao, Yang Sun
Published July 1, 2024
Citation Information: J Clin Invest. 2024;134(13):e175560. https://doi.org/10.1172/JCI175560.
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Research Article Cell biology Ophthalmology

Primary cilia formation requires the Leigh syndrome–associated mitochondrial protein NDUFAF2

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Abstract

Mitochondria-related neurodegenerative diseases have been implicated in the disruption of primary cilia function. Mutation in an intrinsic mitochondrial complex I component NDUFAF2 has been identified in Leigh syndrome, a severe inherited mitochondriopathy. Mutations in ARMC9, which encodes a basal body protein, cause Joubert syndrome, a ciliopathy with defects in the brain, kidney, and eye. Here, we report a mechanistic link between mitochondria metabolism and primary cilia signaling. We discovered that loss of NDUFAF2 caused both mitochondrial and ciliary defects in vitro and in vivo and identified NDUFAF2 as a binding partner for ARMC9. We also found that NDUFAF2 was both necessary and sufficient for cilia formation and that exogenous expression of NDUFAF2 rescued the ciliary and mitochondrial defects observed in cells from patients with known ARMC9 deficiency. NAD+ supplementation restored mitochondrial and ciliary dysfunction in ARMC9-deficient cells and zebrafish and ameliorated the ocular motility and motor deficits of a patient with ARMC9 deficiency. The present results provide a compelling mechanistic link, supported by evidence from human studies, between primary cilia and mitochondrial signaling. Importantly, our findings have significant implications for the development of therapeutic approaches targeting ciliopathies.

Authors

Chien-Hui Lo, Zhiquan Liu, Siyu Chen, Frank Lin, Andrew R. Berneshawi, Charles Q. Yu, Euna B. Koo, Tia J. Kowal, Ke Ning, Yang Hu, Won-Jing Wang, Y. Joyce Liao, Yang Sun

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Figure 1

Loss of NDUFAF2 in RPE cells results in primary cilia defects.

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Loss of NDUFAF2 in RPE cells results in primary cilia defects.
(A) NDUFA...
(A) NDUFAF2WT was stably expressed in NDUFAF2–/– cells. Western blot analysis was performed with antibodies against NDUFAF2 and GAPDH. (B) Cells stained with TOMM20 (green) and NDUFAF2 (red) antibodies. DNA stained with DAPI (blue). Scale bar: 10 μm. (C) NDUFAF2 staining of mitochondria in wild-type, NDUFAF2–/–, and NDUFAF2WT-re-expressing RPE1 cells. (D) Cells stained with polyglutamylated tubulin (green) antibodies. DNA stained with DAPI (blue). Scale bar: 10 μm. (E) Percentage of ciliated cells after serum starving for 2 days; >150 cells analyzed for each independent experiment. (F) Immunofluorescent analysis of cells serum-starved for 2 days. Cells stained with CP110 (red), CEP164 (green), and FOP (FGFR1 oncogene partner; blue) antibodies. DNA stained with DAPI (blue). Scale bars: 10 μm. (G) Graph shows percentage of serum-starved cells with two CP110 dots at the centrioles; >150 cells analyzed for each independent experiment. (H) Immunofluorescent analysis of cells serum-starved for 6 hours. Cells were stained with myosin-Va (red) and centrin (green) antibodies. DNA stained with DAPI (blue). Scale bar: 2 μm. (I) Percentage of cells with ciliary vesicles demonstrated by an antibody against myosin-Va after serum starving for 6 hours (CV, ciliary vesicle; NCV, no ciliary vesicle; PCV, preciliary vesicle); >150 cells analyzed for each independent experiment. (J) Immunostaining of cells serum-starved for 2 days. Scale bars: 10 μm. (K) Quantification of NPHP1 signal intensity at the centrioles; >100 cells analyzed for each independent experiment. (L) Immunofluorescent analysis of cells serum-starved for 2 days. Cells stained with TCTN2 (red) and pGlu-Tu (green) antibodies. DNA stained with DAPI (blue). Scale bars: 10 μm, 2 μm. (M) Quantification of TCTN2 signal intensity at the centrioles; >50 cells analyzed for each independent experiment. (N) Immunofluorescent analysis of cells serum-starved for 2 days. Cells stained with MKS1 (red) and pGlu-Tu (green) antibodies. DNA stained with DAPI (blue). Scale bars: 10 μm, 2 μm. (O) Quantification of MKS1 signal intensity at the centrioles; >50 cells analyzed for each independent experiment. Bars represent mean ± SD, n = 3. Exact P values are indicated. ANOVA followed by Tukey-Kramer multiple-comparison test.

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