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BET bromodomain inhibition potentiates radiosensitivity in models of H3K27-altered diffuse midline glioma
Jun Watanabe, Matthew R. Clutter, Michael J. Gullette, Takahiro Sasaki, Eita Uchida, Savneet Kaur, Yan Mo, Kouki Abe, Yukitomo Ishi, Nozomu Takata, Manabu Natsumeda, Samantha Gadd, Zhiguo Zhang, Oren J. Becher, Rintaro Hashizume
Jun Watanabe, Matthew R. Clutter, Michael J. Gullette, Takahiro Sasaki, Eita Uchida, Savneet Kaur, Yan Mo, Kouki Abe, Yukitomo Ishi, Nozomu Takata, Manabu Natsumeda, Samantha Gadd, Zhiguo Zhang, Oren J. Becher, Rintaro Hashizume
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Research Article Oncology

BET bromodomain inhibition potentiates radiosensitivity in models of H3K27-altered diffuse midline glioma

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Abstract

Diffuse midline glioma (DMG) H3K27-altered is one of the most malignant childhood cancers. Radiation therapy remains the only effective treatment yet provides a 5-year survival rate of only 1%. Several clinical trials have attempted to enhance radiation antitumor activity using radiosensitizing agents, although none have been successful. Given this, there is a critical need for identifying effective therapeutics to enhance radiation sensitivity for the treatment of DMG. Using high-throughput radiosensitivity screening, we identified bromo- and extraterminal domain (BET) protein inhibitors as potent radiosensitizers in DMG cells. Genetic and pharmacologic inhibition of BET bromodomain activity reduced DMG cell proliferation and enhanced radiation-induced DNA damage by inhibiting DNA repair pathways. RNA-Seq and the CUT&RUN (cleavage under targets and release using nuclease) analysis showed that BET bromodomain inhibitors regulated the expression of DNA repair genes mediated by H3K27 acetylation at enhancers. BET bromodomain inhibitors enhanced DMG radiation response in patient-derived xenografts as well as genetically engineered mouse models. Together, our results highlight BET bromodomain inhibitors as potential radiosensitizer and provide a rationale for developing combination therapy with radiation for the treatment of DMG.

Authors

Jun Watanabe, Matthew R. Clutter, Michael J. Gullette, Takahiro Sasaki, Eita Uchida, Savneet Kaur, Yan Mo, Kouki Abe, Yukitomo Ishi, Nozomu Takata, Manabu Natsumeda, Samantha Gadd, Zhiguo Zhang, Oren J. Becher, Rintaro Hashizume

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Figure 7

BET bromodomain inhibition altered genome-wide H3K37ac occupancy and transcription in DMG cells.

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BET bromodomain inhibition altered genome-wide H3K37ac occupancy and tra...
CUT&RUN was performed using H3K27ac antibody in SF8628 DMG cells treated with 1 μM AZD5153 or 0.5% DMSO for 48 hours. (A) Pie chart showing the distribution of H3K27ac across the DMG genome. (B) Heatmaps showing H3K27ac occupancy with DMSO versus AZD5153 treatment. Metaplots above indicate corresponding H3K27ac occupancy. Each plot is centered on the summit of the average occupancy and extended 5 kb upstream and downstream (–5 kb and +5 kb, respectively). Corresponding gene expression at the H3K27ac binding sites generated from RNA-Seq are shown to the right. (C) Gene annotation tracks showing H3K27ac occupancy and gene expression for the BRCA1 and RAD51 loci. The enhancer region is highlighted with a square for each gene.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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