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Gut microbes and the liver circadian clock partition glucose and lipid metabolism
Katya Frazier, … , Vanessa A. Leone, Eugene B. Chang
Katya Frazier, … , Vanessa A. Leone, Eugene B. Chang
Published September 15, 2023
Citation Information: J Clin Invest. 2023;133(18):e162515. https://doi.org/10.1172/JCI162515.
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Research Article Metabolism

Gut microbes and the liver circadian clock partition glucose and lipid metabolism

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Abstract

Circadian rhythms govern glucose homeostasis, and their dysregulation leads to complex metabolic diseases. Gut microbes exhibit diurnal rhythms that influence host circadian networks and metabolic processes, yet underlying mechanisms remain elusive. Here, we showed hierarchical, bidirectional communication among the liver circadian clock, gut microbes, and glucose homeostasis in mice. To assess this relationship, we utilized mice with liver-specific deletion of the core circadian clock gene Bmal1 via Albumin-cre maintained in either conventional or germ-free housing conditions. The liver clock, but not the forebrain clock, required gut microbes to drive glucose clearance and gluconeogenesis. Liver clock dysfunctionality expanded proportions and abundances of oscillating microbial features by 2-fold relative to that in controls. The liver clock was the primary driver of differential and rhythmic hepatic expression of glucose and fatty acid metabolic pathways. Absent the liver clock, gut microbes provided secondary cues that dampened these rhythms, resulting in reduced lipid fuel utilization relative to carbohydrates. All together, the liver clock transduced signals from gut microbes that were necessary for regulating glucose and lipid metabolism and meeting energy demands over 24 hours.

Authors

Katya Frazier, Sumeed Manzoor, Katherine Carroll, Orlando DeLeon, Sawako Miyoshi, Jun Miyoshi, Marissa St. George, Alan Tan, Evan A. Chrisler, Mariko Izumo, Joseph S. Takahashi, Mrinalini C. Rao, Vanessa A. Leone, Eugene B. Chang

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Figure 3

Liver circadian clock drives unique patterns of oscillations in microbial abundance.

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Liver circadian clock drives unique patterns of oscillations in microbia...
16S rRNA gene sequencing of stool from SPF WT and LKO male mice every 6 hours over 48 hours via repeat collection (n = 7–8/group). (A) Proportion of nonoscillating (gray area) versus significantly oscillating (colored areas) amplicon sequence variants (ASVs) identified via eJTK (GammaBH < 0.05). Oscillating (Osc) ASVs were divided by taxonomic class. (B) Abundance counts of total versus oscillating ASVs within Bacteroidales and Clostridiales classes. (C) Number of oscillating Clostridiales ASVs at the family level in WT and LKO mice. (D) Abundance counts of total versus oscillating ASVs within Lachnospiraceae and Ruminococcaceae families. (E) R2 values of nonzero base sinusoidal fits of log ratios at each time point relative to ZT2. Data represent mean ± SEM. Lines in box plots represent the median, and whiskers represent the minimum and maximum, respectively. Two-tailed paired t test was performed.

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