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Mesenchymal cell replacement corrects thymic hypoplasia in murine models of 22q11.2 deletion syndrome
Pratibha Bhalla, … , Antonio Baldini, Nicolai S.C. van Oers
Pratibha Bhalla, … , Antonio Baldini, Nicolai S.C. van Oers
Published September 22, 2022
Citation Information: J Clin Invest. 2022;132(22):e160101. https://doi.org/10.1172/JCI160101.
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Research Article Genetics Immunology

Mesenchymal cell replacement corrects thymic hypoplasia in murine models of 22q11.2 deletion syndrome

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Abstract

22q11.2 deletion syndrome (22q11.2DS) is the most common human chromosomal microdeletion, causing developmentally linked congenital malformations, thymic hypoplasia, hypoparathyroidism, and/or cardiac defects. Thymic hypoplasia leads to T cell lymphopenia, which most often results in mild SCID. Despite decades of research, the molecular underpinnings leading to thymic hypoplasia in 22q11.2DS remain unknown. Comparison of embryonic thymuses from mouse models of 22q11.2DS (Tbx1neo2/neo2) revealed proportions of mesenchymal, epithelial, and hematopoietic cell types similar to those of control thymuses. Yet, the small thymuses were growth restricted in fetal organ cultures. Replacement of Tbx1neo2/neo2 thymic mesenchymal cells with normal ones restored tissue growth. Comparative single-cell RNA-Seq of embryonic thymuses uncovered 17 distinct cell subsets, with transcriptome differences predominant in the 5 mesenchymal subsets from the Tbx1neo2/neo2 cell line. The transcripts affected included those for extracellular matrix proteins, consistent with the increased collagen deposition we observed in the small thymuses. Attenuating collagen cross-links with minoxidil restored thymic tissue expansion for hypoplastic lobes. In colony-forming assays, the Tbx1neo2/neo2-derived mesenchymal cells had reduced expansion potential, in contrast to the normal growth of thymic epithelial cells. These findings suggest that mesenchymal cells were causal to the small embryonic thymuses in the 22q11.2DS mouse models, which was correctable by substitution with normal mesenchyme.

Authors

Pratibha Bhalla, Qiumei Du, Ashwani Kumar, Chao Xing, Angela Moses, Igor Dozmorov, Christian A. Wysocki, Ondine B. Cleaver, Timothy J. Pirolli, Mary Louise Markert, Maria Teresa de la Morena, Antonio Baldini, Nicolai S.C. van Oers

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Figure 5

scRNA-Seq reveals distinct transcript levels in mesenchymal cells, TECs, and endothelial cells in embryonic thymuses from control, Tbx1neo2/neo2, and Foxn1-mutant mouse models.

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scRNA-Seq reveals distinct transcript levels in mesenchymal cells, TECs,...
(A) Fetal thymuses, obtained from normal, Tbx1neo2/neo2, and Foxn11089/1089 E13–E13.5 embryos, were used for scRNA-Seq. t-Distributed stochastic neighbor embedding (tSNE) plots reveal 17 distinct cell subgroups for all 3 paired thymic lobes (Tbx1+/+, Tbx1neo2/neo2, and Foxn11089/1089 genotypes), with the relative percentages of these subgroups differing among the 3 genotypes. Five distinct mesenchymal cell clusters (M-1 to M-5), 6 epithelial cell groups (E-1 to E-6), an endothelial cell population (En-1), 4 hematopoietic cell types (H-1 to H-4), a RBC (U-1), and a mitochondrial signature are present in each of the thymuses. The tSNE plot for the Foxn1 hypoplastic lobes (Foxn11089/1089) was generated by changing the total number cells to 6,000. (B) Transcripts that defined the cell subsets were compared among the 5 mesenchymal, 6 epithelial, and 4 hematopoietic cell clusters. A dot plot comparison revealed key gene expression differences among the various cell populations. (C) Heatmaps show the differential expression of transcripts of biological importance for mesenchymal and epithelial cell clusters along with the 1 endothelial cell cluster, respectively. Regions boxed in red represent the Tbx1neo2/neo2 thymus. (D and E) Pathway enrichment analyses of mesenchymal (D) and endothelial (E) clusters with DEGs revealed key distinctions between control, Tbx1neo2/neo2, and Foxn11089/1089 fetal thymuses.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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