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A systems biology approach identifies the role of dysregulated PRDM6 in the development of hypertension
Kushan L. Gunawardhana, … , James P. Noonan, Arya Mani
Kushan L. Gunawardhana, … , James P. Noonan, Arya Mani
Published January 5, 2023
Citation Information: J Clin Invest. 2023;133(4):e160036. https://doi.org/10.1172/JCI160036.
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Research Article Cardiology Nephrology

A systems biology approach identifies the role of dysregulated PRDM6 in the development of hypertension

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Abstract

Genetic variants in the third intron of the PRDM6 gene have been associated with BP traits in multiple GWAS. By combining fine mapping, massively parallel reporter assays, and gene editing, we identified super enhancers that drive the expression of PRDM6 and are partly regulated by STAT1 as the causal variants for hypertension. The heterozygous disruption of Prdm6 in mice expressing Cre recombinase under the control of mouse smooth muscle cell protein 22-α promoter (Prdm6fl/+ SM22-Cre) exhibited a markedly higher number of renin-producing cells in the kidneys at E18.5 compared with WT littermates and developed salt-induced systemic hypertension that was completely responsive to the renin inhibitor aliskiren. Strikingly, RNA-Seq analysis of the mouse aortas identified a network of PRDM6-regulated genes that are located in GWAS-associated loci for blood pressure, most notably Sox6, which modulates renin expression in the kidney. Accordingly, the smooth muscle cell–specific disruption of Sox6 in Prdm6fl/+ SM22-Cre mice resulted in a dramatic reduction of renin. Fate mapping and histological studies also showed increased numbers of neural crest–derived cells accompanied by increased collagen deposition in the kidneys of Prdm6fl/+ Wnt1Cre-ZsGreen1Cre mice compared with WT mice. These findings establish the role of PRDM6 as a regulator of renin-producing cell differentiation into smooth muscle cells and as an attractive target for the development of antihypertensive drugs.

Authors

Kushan L. Gunawardhana, Lingjuan Hong, Trojan Rugira, Severin Uebbing, Joanna Kucharczak, Sameet Mehta, Dineth R. Karunamuni, Brenda Cabera-Mendoza, Neeru Gandotra, Curt Scharfe, Renato Polimanti, James P. Noonan, Arya Mani

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Figure 8

Sox6 is transcriptionally regulated by PRDM6.

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Sox6 is transcriptionally regulated by PRDM6.
(A) Sox6 transcript level...
(A) Sox6 transcript levels in Prdm6fl/fl SM22-Cre and WT littermate mouse aortas (n = 3 per group). (B) The immunofluorescence staining of Sox6 in heterozygous, homozygous Prdm6-knockout mice and their WT littermates. The number of cells expressing Sox6 (left) and mean Sox6 intensity (right) are shown underneath the figures (n = 3 mice per group and 20 fields per mouse). (C) PRDM6 and SOX6 expression level in HEK293T cells upon 22 kb CRISPR deletion of the PRDM6 intronic region. Experiments were done in triplicates. (D) PRDM6 binding sites in SOX6 gene in HEK293T cells according to ENCODE ChIP-Seq data (doi:10.17989/ENCSR892QHR). 2 binding loci are zoomed for clarity. (E) Immunofluorescent images of Prdm6fl/+, Prdm6fl/fl Sm22-Cre, Sox6fl/fl Sm22-Cre and Prdm6fl/fl Sox6fl/fl Sm22-Cre embryonic kidneys at E18.5 labeled with SMA (red) and renin (green) along with nuclear stain (blue). n = 3 mice per group and 10 fields per genotype. The plot on the right shows the quantification of a number of cells producing renin in 4 genotypes. Scale bars: 20 μm. IF figures: Kruskal-Wallis 1-way ANOVA, ****P < 0.0001, ***P < 0.001, *P < 0.05. RT-qPCRs, multiple unpaired, 2-tailed t tests. ****P < 0.0001, ***P < 0.001, *P < 0.05. Note: The Prdm6fl/+ and Prdm6fl/fl Sm22-Cre in Figure 7F are shown again in Figure 8E for comparison.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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