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FOXA2 suppresses endometrial carcinogenesis and epithelial-mesenchymal transition by regulating enhancer activity
Subhransu S. Sahoo, … , Ram S. Mani, Diego H. Castrillon
Subhransu S. Sahoo, … , Ram S. Mani, Diego H. Castrillon
Published June 15, 2022
Citation Information: J Clin Invest. 2022;132(12):e157574. https://doi.org/10.1172/JCI157574.
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Research Article Oncology

FOXA2 suppresses endometrial carcinogenesis and epithelial-mesenchymal transition by regulating enhancer activity

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Abstract

FOXA2 encodes a transcription factor mutated in 10% of endometrial cancers (ECs), with a higher mutation rate in aggressive variants. FOXA2 has essential roles in embryonic and uterine development. However, FOXA2’s role in EC is incompletely understood. Functional investigations using human and mouse EC cell lines revealed that FOXA2 controls endometrial epithelial gene expression programs regulating cell proliferation, adhesion, and endometrial-epithelial transition. In live animals, conditional inactivation of Foxa2 or Pten alone in endometrial epithelium did not result in ECs, but simultaneous inactivation of both genes resulted in lethal ECs with complete penetrance, establishing potent synergism between Foxa2 and PI3K signaling. Studies in tumor-derived cell lines and organoids highlighted additional invasion and cell growth phenotypes associated with malignant transformation and identified key mediators, including Myc and Cdh1. Transcriptome and cistrome analyses revealed that FOXA2 broadly controls gene expression programs through modification of enhancer activity in addition to regulating specific target genes, rationalizing its tumor suppressor functions. By integrating results from our cell lines, organoids, animal models, and patient data, our findings demonstrated that FOXA2 is an endometrial tumor suppressor associated with aggressive disease and with shared commonalities among its roles in endometrial function and carcinogenesis.

Authors

Subhransu S. Sahoo, Susmita G. Ramanand, Yunpeng Gao, Ahmed Abbas, Ashwani Kumar, Ileana C. Cuevas, Hao-Dong Li, Mitzi Aguilar, Chao Xing, Ram S. Mani, Diego H. Castrillon

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Figure 7

Transcriptional reprogramming by FOXA2.

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Transcriptional reprogramming by FOXA2.
(A) Venn diagram representing H3...
(A) Venn diagram representing H3K27ac peaks. (B) Average coverage plot and heatmap representation of ChIP-Seq signals ±4 kb around acetyl histone (H3K27ac) peaks. (C) Average coverage plot and heatmap representation of ChIP-Seq signals ±4 kb around transcriptional start sites. (D) Genome browser representation of H3K27ac peaks in the MYC gene. (E) Western blot analysis of H3 and H3K27ac protein expression in ISK-EV, ISK-FOXA2, FP-EV, and FP-Foxa2 cells. (F and G) Gene set enrichment analysis (GSEA). Genes shaded with red in the heatmap are upregulated in parental ISK cells (in comparison to ISK-FOXA2). Genes shaded with blue in the heatmap are upregulated in ISK-FOXA2 (in comparison with parental ISK cells).

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