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X chromosome dosage of histone demethylase KDM5C determines sex differences in adiposity
Jenny C. Link, … , Arthur P. Arnold, Karen Reue
Jenny C. Link, … , Arthur P. Arnold, Karen Reue
Published July 23, 2020
Citation Information: J Clin Invest. 2020;130(11):5688-5702. https://doi.org/10.1172/JCI140223.
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Research Article Genetics Metabolism

X chromosome dosage of histone demethylase KDM5C determines sex differences in adiposity

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Abstract

Males and females differ in body composition and fat distribution. Using a mouse model that segregates gonadal sex (ovaries and testes) from chromosomal sex (XX and XY), we showed that XX chromosome complement in combination with a high-fat diet led to enhanced weight gain in the presence of male or female gonads. We identified the genomic dosage of Kdm5c, an X chromosome gene that escapes X chromosome inactivation, as a determinant of the X chromosome effect on adiposity. Modulating Kdm5c gene dosage in XX female mice to levels that are normally present in males resulted in reduced body weight, fat content, and food intake to a degree similar to that seen with altering the entire X chromosome dosage. In cultured preadipocytes, the levels of KDM5C histone demethylase influenced chromatin accessibility (ATAC-Seq), gene expression (RNA-Seq), and adipocyte differentiation. Both in vitro and in vivo, Kdm5c dosage influenced gene expression involved in extracellular matrix remodeling, which is critical for adipocyte differentiation and adipose tissue expansion. In humans, adipose tissue KDM5C mRNA levels and KDM5C genetic variants were associated with body mass. These studies demonstrate that the sex-dependent dosage of Kdm5c contributes to male/female differences in adipocyte biology and highlight X-escape genes as a critical component of female physiology.

Authors

Jenny C. Link, Carrie B. Wiese, Xuqi Chen, Rozeta Avetisyan, Emilio Ronquillo, Feiyang Ma, Xiuqing Guo, Jie Yao, Matthew Allison, Yii-Der Ida Chen, Jerome I. Rotter, Julia S. El -Sayed Moustafa, Kerrin S. Small, Shigeki Iwase, Matteo Pellegrini, Laurent Vergnes, Arthur P. Arnold, Karen Reue

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Figure 5

Kdm5c knockdown in preadipocytes alters gene expression and chromatin accessibility at promoters enriched in adipogenic transcription factor motifs.

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Kdm5c knockdown in preadipocytes alters gene expression and chromatin a...
(A) Differential gene expression induced by Kdm5c knockdown in 3T3-L1 preadipocytes. Top: timeline of sample generation (n = 5 samples for each treatment at each time point). Volcano plots show genes that are differentially expressed (EdgeR) in response to Kdm5c knockdown (light blue dots). Differentially expressed genes with greater than 1.25-fold difference were analyzed for pathway enrichment, and genes belonging to 3 most significant pathways are highlighted with colored dots: red dots, genes involved in ECM organization (ECM); dark blue dots, genes in immune signaling pathways; purple dots, genes in interleukin pathway. (B) ATAC-Seq analysis of the same samples in A showed altered chromatin accessibility after Kdm5c knockdown at genomic locations indicated (n = 4 samples for each treatment at each time point). Alterations at proximal gene promoters (within 1.5 kb of transcription start sites) progressively increased each day after knockdown. (C) Differentially expressed genes from day 0 were overlaid with differential ATAC-Seq promoter peaks from day 0, and 48% of the corresponding genes showed overlap in the 2 data sets. (D) Genes that showed differential mRNA expression and ATAC-Seq promoter peaks showed enrichment for specific transcription factor motifs in the promoter region.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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