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Plasma deconvolution identifies broadly neutralizing antibodies associated with hepatitis C virus clearance
Valerie J. Kinchen, … , James E. Crowe Jr, Justin R. Bailey
Valerie J. Kinchen, … , James E. Crowe Jr, Justin R. Bailey
Published August 13, 2019
Citation Information: J Clin Invest. 2019;129(11):4786-4796. https://doi.org/10.1172/JCI130720.
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Research Article Immunology Virology

Plasma deconvolution identifies broadly neutralizing antibodies associated with hepatitis C virus clearance

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Abstract

A vaccine for hepatitis C virus (HCV) is urgently needed. Development of broadly neutralizing plasma antibodies during acute infection is associated with HCV clearance, but the viral epitopes of these plasma antibodies are unknown. Identifying these epitopes could define the specificity and function of neutralizing antibodies (NAbs) that should be induced by a vaccine. Here, we present the development and application of a high-throughput method that deconvolutes polyclonal anti-HCV NAbs in plasma, delineating the epitope specificities of anti-HCV NAbs in acute-infection plasma of 44 humans with subsequent clearance or persistence of HCV. Remarkably, we identified multiple broadly neutralizing antibody combinations that were associated with greater plasma neutralizing breadth and with HCV clearance. These studies have the potential to inform new strategies for vaccine development by identifying broadly neutralizing antibody combinations in plasma associated with the natural clearance of HCV, while also providing a high-throughput assay that could identify these responses after vaccination trials.

Authors

Valerie J. Kinchen, Guido Massaccesi, Andrew I. Flyak, Madeleine C. Mankowski, Michelle D. Colbert, William O. Osburn, Stuart C. Ray, Andrea L. Cox, James E. Crowe Jr, Justin R. Bailey

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Figure 7

Focusing of the humoral response toward bNAbs and expression of multiple bNAb types was associated with HCV clearance.

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Focusing of the humoral response toward bNAbs and expression of multiple...
(A) Proportion of persistence and clearance plasma responses attributed to each NAb type. Values are means, and error bars are SEM. *P < 0.05 by 1-way ANOVA adjusted for multiple comparisons using Sidak’s method. (B) Total proportion of persistence and clearance plasma responses attributed to bNAbs (AR3A, HEPC74, HC84.26, or AR4A). Horizontal lines are means, and whiskers are SD. **P < 0.01 by 2-sided t test. (C) Number of NAb types positive above a threshold of 0.10 for each plasma sample. Horizontal lines are means, and whiskers are SD. P = 0.24 by 2-sided t test. (D) Number of bNAb types (AR3A, HEPC74, HC84.26, or AR4A) positive above a threshold of 0.10 for each plasma sample. Horizontal lines are means, and whiskers are SD. *P < 0.05 by 2-sided t test. (E) Frequency of each observed bNAb combination across all persistence or clearance subjects.

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