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Transcription factor ICBP90 regulates the MIF promoter and immune susceptibility locus
Jie Yao, … , Patty Lee, Richard Bucala
Jie Yao, … , Patty Lee, Richard Bucala
Published January 11, 2016
Citation Information: J Clin Invest. 2016;126(2):732-744. https://doi.org/10.1172/JCI81937.
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Research Article Immunology

Transcription factor ICBP90 regulates the MIF promoter and immune susceptibility locus

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Abstract

The immunoregulatory cytokine macrophage migration inhibitory factor (MIF) is encoded in a functionally polymorphic locus that is linked to the susceptibility of autoimmune and infectious diseases. The MIF promoter contains a 4-nucleotide microsatellite polymorphism (–794 CATT) that repeats 5 to 8 times in the locus, with greater numbers of repeats associated with higher mRNA levels. Because there is no information about the transcriptional regulation of these common alleles, we used oligonucleotide affinity chromatography and liquid chromatography–mass spectrometry to identify nuclear proteins that interact with the –794 CATT5–8 site. An analysis of monocyte nuclear lysates revealed that the transcription factor ICBP90 (also known as UHRF1) is the major protein interacting with the MIF microsatellite. We found that ICBP90 is essential for MIF transcription from monocytes/macrophages, B and T lymphocytes, and synovial fibroblasts, and TLR-induced MIF transcription is regulated in an ICBP90- and –794 CATT5–8 length–dependent manner. Whole-genome transcription analysis of ICBP90 shRNA–treated rheumatoid synoviocytes uncovered a subset of proinflammatory and immune response genes that overlapped with those regulated by MIF shRNA. In addition, the expression levels of ICBP90 and MIF were correlated in joint synovia from patients with rheumatoid arthritis. These findings identify ICBP90 as a key regulator of MIF transcription and provide functional insight into the regulation of the polymorphic MIF locus.

Authors

Jie Yao, Lin Leng, Maor Sauler, Weiling Fu, Junsong Zheng, Yi Zhang, Xin Du, Xiaoqing Yu, Patty Lee, Richard Bucala

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Figure 3

ICBP90 binds to the MIF –794 CATT5–8 promoter sequence in an activation- and CATT length–dependent manner.

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ICBP90 binds to the MIF –794 CATT5–8 promoter sequence in an activation-...
(A) ICBP90 mRNA expression analyzed by qPCR in human THP-1 monocytes (1 × 106) treated with 0.5 μg of a control or ICBP90 shRNA prior to stimulation with LPS (100 ng/ml, 16 hours). (B) Corresponding cellular content of ICBP90, as measured by Western blotting, with anti-ICBP90 or anti–β-actin as a protein control. (C) Detection of DNA-bound ICBP90 after incubation of the nuclear lysates that were collected from the cells used to determine cellular ICBP90 content with 100 nM each of the biotin-labeled 5′CATT0–8 oligonucleotides spanning the MIF promoter (–865/–833 to –752). The 5′CATT0–8 oligonucleotide–bound proteins were removed by streptavidin bead absorption after 3 hours at 4°C, and 1 μg of each sample was electrophoresed and immunoblotted with an anti-ICBP90 or an anti–Pit-1 antibody. (D) Quantification by qPCR of MIF mRNA in human THP-1 monocytes treated with ICBP90 or control shRNA followed by stimulation with LPS (100 ng/ml, 16 hours), together with corresponding effects on (E) MIF and (F) TNF-α protein secretion into 24-hour-conditioned medium. (G) Western blot detection of 5′CATT0–8-bound ICBP90 after incubation of nuclear lysates from LPS-stimulated human THP-1 monocytes cotreated with the PKA inhibitor H-89 (20 μM) or vehicle control. The 5′CATT0–8 oligonucleotide–bound proteins were removed by streptavidin bead absorption after 3 hours at 4°C and 1 μg of each sample was electrophoresed and immunoblotted with an anti-ICBP90 (Total) or anti-pICBP90 antibody. Data are mean+SD of 3 measurements, with all experiments replicated twice (n = 3 measurements per experiment). *P < 0.05 for LPS– vs. LPS+ controls, **P < 0.01 for ICBP90 shRNA vs. corresponding control shRNA (Con) (1-way ANOVA with Tukey’s post-hoc test).

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