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Transcription factor ICBP90 regulates the MIF promoter and immune susceptibility locus
Jie Yao, … , Patty Lee, Richard Bucala
Jie Yao, … , Patty Lee, Richard Bucala
Published January 11, 2016
Citation Information: J Clin Invest. 2016;126(2):732-744. https://doi.org/10.1172/JCI81937.
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Research Article Immunology

Transcription factor ICBP90 regulates the MIF promoter and immune susceptibility locus

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Abstract

The immunoregulatory cytokine macrophage migration inhibitory factor (MIF) is encoded in a functionally polymorphic locus that is linked to the susceptibility of autoimmune and infectious diseases. The MIF promoter contains a 4-nucleotide microsatellite polymorphism (–794 CATT) that repeats 5 to 8 times in the locus, with greater numbers of repeats associated with higher mRNA levels. Because there is no information about the transcriptional regulation of these common alleles, we used oligonucleotide affinity chromatography and liquid chromatography–mass spectrometry to identify nuclear proteins that interact with the –794 CATT5–8 site. An analysis of monocyte nuclear lysates revealed that the transcription factor ICBP90 (also known as UHRF1) is the major protein interacting with the MIF microsatellite. We found that ICBP90 is essential for MIF transcription from monocytes/macrophages, B and T lymphocytes, and synovial fibroblasts, and TLR-induced MIF transcription is regulated in an ICBP90- and –794 CATT5–8 length–dependent manner. Whole-genome transcription analysis of ICBP90 shRNA–treated rheumatoid synoviocytes uncovered a subset of proinflammatory and immune response genes that overlapped with those regulated by MIF shRNA. In addition, the expression levels of ICBP90 and MIF were correlated in joint synovia from patients with rheumatoid arthritis. These findings identify ICBP90 as a key regulator of MIF transcription and provide functional insight into the regulation of the polymorphic MIF locus.

Authors

Jie Yao, Lin Leng, Maor Sauler, Weiling Fu, Junsong Zheng, Yi Zhang, Xin Du, Xiaoqing Yu, Patty Lee, Richard Bucala

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Figure 2

Proteomic identification of the transcription factor ICBP90.

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Proteomic identification of the transcription factor ICBP90.
(A) 2D gel ...
(A) 2D gel electrophoresis and silver staining of human THP-1 monocyte nuclear proteins eluted from the MIF promoter 5′CATT0- (control), 5′CATT5-, and 5′CATT8-containing oligonucleotides, respectively. (B) MIF promoter 5′CATTX length–dependent retention of ICBP90 detected by Western blotting of eluted nuclear proteins with an anti-ICBP90 antibody. Anti–β-actin served as a protein loading control. (C) EMSA verification of the interaction of ICBP90 with the 5′CATT8 site in the MIF promoter. Nuclear lysate decreases the mobility of a biotin-labeled, CATT8-containing MIF promoter oligonucleotide (lanes 1 and 6). This effect is eliminated by the addition of a 200-fold excess of unlabeled 5′CATT8 oligonucleotide (lane 3) but not 5′CATT0 oligonucleotide (lane 2) and inhibited by anti-ICBP90 (lane 4) but not control IgG (lane 5). (D) Amplification of MIF promoter DNA by ChIP of human PBMC DNA with anti-ICBP90 but not control IgG. RU, fluorescence relative units of amplified DNA. Similar results were obtained with PBMC DNA from healthy control and subjects with rheumatoid arthritis (data not shown). (E) ICBP90 mRNA expression analyzed by qPCR in 1 × 106 HEK293 cells transfected 16 hours previously with pCMV-ICBP90 or an empty vector (pCMVcon). (F) Intracellular ICBP90 protein analyzed by Western blotting of cell lysates together with a β-actin loading control. (G) Corresponding changes in intracellular MIF mRNA (qPCR), (H) intracellular MIF protein content (Western blotting), and (I) MIF secretion into 24-hour conditioned medium (ELISA). Data are mean+SD of 3 measurements, with all experiments replicated twice (n = 3 measurements per experiment). **P < 0.01 by 2-tailed Student’s t test. Displayed blots are representative of 3 independent experiments.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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