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Antigen expression determines adenoviral vaccine potency independent of IFN and STING signaling
Kylie M. Quinn, Daniel E. Zak, Andreia Costa, Ayako Yamamoto, Kathrin Kastenmuller, Brenna J. Hill, Geoffrey M. Lynn, Patricia A. Darrah, Ross W.B. Lindsay, Lingshu Wang, Cheng Cheng, Alfredo Nicosia, Antonella Folgori, Stefano Colloca, Riccardo Cortese, Emma Gostick, David A. Price, Jason G.D. Gall, Mario Roederer, Alan Aderem, Robert A. Seder
Kylie M. Quinn, Daniel E. Zak, Andreia Costa, Ayako Yamamoto, Kathrin Kastenmuller, Brenna J. Hill, Geoffrey M. Lynn, Patricia A. Darrah, Ross W.B. Lindsay, Lingshu Wang, Cheng Cheng, Alfredo Nicosia, Antonella Folgori, Stefano Colloca, Riccardo Cortese, Emma Gostick, David A. Price, Jason G.D. Gall, Mario Roederer, Alan Aderem, Robert A. Seder
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Research Article

Antigen expression determines adenoviral vaccine potency independent of IFN and STING signaling

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Abstract

Recombinant adenoviral vectors (rAds) are lead vaccine candidates for protection against a variety of pathogens, including Ebola, HIV, tuberculosis, and malaria, due to their ability to potently induce T cell immunity in humans. However, the ability to induce protective cellular immunity varies among rAds. Here, we assessed the mechanisms that control the potency of CD8 T cell responses in murine models following vaccination with human-, chimpanzee-, and simian-derived rAds encoding SIV-Gag antigen (Ag). After rAd vaccination, we quantified Ag expression and performed expression profiling of innate immune response genes in the draining lymph node. Human-derived rAd5 and chimpanzee-derived chAd3 were the most potent rAds and induced high and persistent Ag expression with low innate gene activation, while less potent rAds induced less Ag expression and robustly induced innate immunity genes that were primarily associated with IFN signaling. Abrogation of type I IFN or stimulator of IFN genes (STING) signaling increased Ag expression and accelerated CD8 T cell response kinetics but did not alter memory responses or protection. These findings reveal that the magnitude of rAd-induced memory CD8 T cell immune responses correlates with Ag expression but is independent of IFN and STING and provide criteria for optimizing protective CD8 T cell immunity with rAd vaccines.

Authors

Kylie M. Quinn, Daniel E. Zak, Andreia Costa, Ayako Yamamoto, Kathrin Kastenmuller, Brenna J. Hill, Geoffrey M. Lynn, Patricia A. Darrah, Ross W.B. Lindsay, Lingshu Wang, Cheng Cheng, Alfredo Nicosia, Antonella Folgori, Stefano Colloca, Riccardo Cortese, Emma Gostick, David A. Price, Jason G.D. Gall, Mario Roederer, Alan Aderem, Robert A. Seder

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Figure 8

Comparison of local (dLNs) and systemic (PBMCs) innate gene activation.

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Comparison of local (dLNs) and systemic (PBMCs) innate gene activation.
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(A) Heat map of 818 genes significantly responsive to rAd vaccination in dLNs or PBMCs, for mice or humans, at 24 hours after vaccination. Genes are clustered into concordantly (group I, 262 genes; group II, 285 genes) or discordantly (group III, 194 genes; group IV, 77 genes) regulated genes. Colors indicate scaled fold changes (magenta, upregulated; white, no change; cyan, downregulated) for the mean – SEM, mean, and mean + SEM response compared with the average response to PBS control (mice) or levels before vaccination. (B) Median expression fold changes across all vectors and species in dLNs plotted against the median expression fold changes in PBMCs for all genes comprising the IFN response module or inflammation module. Each point represents a unique gene. (C) Fold changes in gene expression as compared with PBS control mice for select genes that are discordantly (Csf1r and Ccr2 or Cd19 and Cxcr5) or concordantly (Oas2 and Eif2ak2) regulated. (D) Average gene expression fold changes (compared with PBS) induced by rAd5 are plotted against fold changes induced by rAd28 in dLNs or PBMC samples for all genes that were found to be concordantly regulated between the 2 tissues. Each point represents a unique gene. The red line indicates y = x.

Copyright © 2026 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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