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Clinical Research and Public HealthIn-Press PreviewImmunologyInfectious disease
Open Access | 10.1172/JCI190736
1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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Ma, F.
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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1Division of Dermatology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, United States of America
2Department of Molecular, Cell, and Developmental Biology, UCLA, Los Angeles, United States of America
3Department of Bioengineering, UCLA, Los Angeles, United States of America
4Department of Dermatology, University of Michigan School of Medicine, Ann Arbor, United States of America
5Broad Institute, MIT and Harvard, Cambridge, United States of America
6Leprosy Laboratory, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
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Published June 26, 2025 - More info
BACKGROUND. Reversal reactions (RR) in leprosy are acute immune episodes marked by inflammation and bacterial clearance, offering a model to study the dynamics of host responses to Mycobacterium leprae. These episodes are often severe and difficult to treat, frequently progressing to permanent disabilities. We aimed to characterize the immune mechanisms and identify antimicrobial effectors during RR.
METHODS. We performed RNA sequencing on paired skin biopsy specimens from nine leprosy patients collected before and at RR diagnosis, followed by differential gene expression and functional analysis. A machine learning classifier was applied to predict membrane-permeabilizing proteins. Antimicrobial activity was assessed in M. leprae-infected macrophages and axenic cultures.
RESULTS. In the paired pre-RR and RR biopsy specimens, a 64-gene antimicrobial response signature was upregulated during RR and correlated with reduced M. leprae burden. Predicted upstream regulators included IL-1β, TNF, IFN-γ, and IL-17, indicating activation of both Th1 and Th17 pathways. A machine learning classifier identified 28 genes with predicted membrane-permeabilizing antimicrobial activity, including S100A8. Four proteins (S100A7, S100A8, CCL17, CCL19) demonstrated antimicrobial activity against M. leprae in vitro. Scanning electron microscopy revealed membrane damage in bacteria exposed to these proteins.
CONCLUSION. RR is associated with a robust antimicrobial gene program regulated by Th1/Th17 cytokines. We identified potentially novel host antimicrobial effectors that exhibit activity against M. leprae, suggesting potential strategies to bolster Th1/Th17 responses for combating intracellular mycobacterial infections.
FUNDING. NIH grants R01 AI022553, R01 AR040312, R01 AR073252, R01 AI166313, R01 AI169526, P50 AR080594, 4R37 AI052453-21, and NSF grant DMR2325840.
View Supplemental Dataset 1: Differential gene expression analysis of RR vs. pre-RR groups.
View Supplemental Dataset 2: Antimicrobial Gene list from Gene Cards and APD3 database.
View Supplemental Dataset 3: Validation of the 64-gene antimicrobial response signature.
View Supplemental Dataset 4: RR upregulated genes screened by the machine learning classifier.
View Supplemental Dataset 5: 77 antimicrobial genes identified in RR skin lesions.