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Dissecting the mechanisms of MASLD fibrosis in the era of single-cell and spatial omics
Fabio Colella, … , Neil C. Henderson, Prakash Ramachandran
Fabio Colella, … , Neil C. Henderson, Prakash Ramachandran
Published September 16, 2025
Citation Information: J Clin Invest. 2025;135(18):e186421. https://doi.org/10.1172/JCI186421.
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Review Series

Dissecting the mechanisms of MASLD fibrosis in the era of single-cell and spatial omics

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Abstract

Metabolic dysfunction–associated steatotic liver disease (MASLD), now the most common cause of chronic liver disease, is estimated to affect around 30% of the global population. In MASLD, chronic liver injury can result in scarring or fibrosis, with the degree of fibrosis being the best-known predictor of adverse clinical outcomes. Hence, there is huge interest in developing new therapies to inhibit or reverse fibrosis in MASLD. However, this has been challenging to achieve, as the biology of fibrosis and candidate antifibrotic therapeutic targets have remained poorly described in patient samples. In recent years, the advent of single-cell and spatial omics approaches that can be applied to human samples have started to transform our understanding of fibrosis biology in MASLD. In this Review, we describe these technological advances and discuss the new insights such studies have provided, focusing on the role of epithelial cell plasticity, mesenchymal cell activation, scar-associated macrophage accumulation, and inflammatory cell stimulation as regulators of liver fibrosis. We also consider how omics techniques can enhance our understanding of evolving concepts in the field, such as hot versus cold fibrosis and the mechanisms of liver fibrosis regression. Finally, we touch on future developments and how they are likely to inform a more mechanistic understanding about how fibrosis might differ between patients and how this could influence optimal therapeutic approaches.

Authors

Fabio Colella, Neil C. Henderson, Prakash Ramachandran

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Figure 2

The role of immune cells in MASLD fibrosis.

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The role of immune cells in MASLD fibrosis.
The activation of HSCs, whic...
The activation of HSCs, which are responsible for ECM remodeling and fibrosis progression, is tightly controlled by myeloid and lymphoid cells. After injury, monocytes migrate to the liver, where they differentiate into SAMacs, which promote HSC collagen deposition. HSCs can promote additional monocyte recruitment through the secretion of CCL2, IL-6, and EVs. DRANs and recruited neutrophils modulate monocyte and HSC activation through NET production. T cells also contribute to tissue injury and HSC activation through a proinflammatory interaction between CD8+ T cells and cDC1 as well as through release of IL-17 and AREG from Th17+ and Treg CD4+ T cells, respectively. B cells become activated by intestine-derived microbial antigens and HSC-secreted retinoic acids, acquiring a proinflammatory phenotype. NK cells can kill activated HSCs and thus promote fibrosis regression, a role which has been shown to be inhibited by obesity. SAMac, scar-associated macrophage; emKC, embryologically derived Kupffer cells; moKC, monocyte-derived Kupffer cells; DRANs, ductular reaction–associated neutrophils; NETs, neutrophil extracellular traps; cDC, classical dendritic cell; Treg, regulatory T cell; HSC, hepatic stellate cell; ECM, extracellular matrix.

Copyright © 2025 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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