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T antigen–specific CD8+ T cells associate with PD-1 blockade response in virus-positive Merkel cell carcinoma
Ulla Kring Hansen, … , Paul T. Nghiem, Sine Reker Hadrup
Ulla Kring Hansen, … , Paul T. Nghiem, Sine Reker Hadrup
Published January 30, 2024
Citation Information: J Clin Invest. 2024;134(8):e177082. https://doi.org/10.1172/JCI177082.
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Research Article Immunology Oncology

T antigen–specific CD8+ T cells associate with PD-1 blockade response in virus-positive Merkel cell carcinoma

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Abstract

Merkel cell carcinoma (MCC) is a highly immunogenic skin cancer primarily induced by Merkel cell polyomavirus, which is driven by the expression of the oncogenic T antigens (T-Ags). Blockade of the programmed cell death protein-1 (PD-1) pathway has shown remarkable response rates, but evidence for therapy-associated T-Ag–specific immune response and therapeutic strategies for the nonresponding fraction are both limited. We tracked T-Ag–reactive CD8+ T cells in peripheral blood of 26 MCC patients under anti-PD1 therapy, using DNA-barcoded pMHC multimers, displaying all peptides from the predicted HLA ligandome of the oncoproteins, covering 33 class I haplotypes. We observed a broad T cell recognition of T-Ags, including identification of 20 T-Ag–derived epitopes we believe to be novel. Broadening of the T-Ag recognition profile and increased T cell frequencies during therapy were strongly associated with clinical response and prolonged progression-free survival. T-Ag–specific T cells could be further boosted and expanded directly from peripheral blood using artificial antigen-presenting scaffolds, even in patients with no detectable T-Ag–specific T cells. These T cells provided strong tumor-rejection capacity while retaining a favorable phenotype for adoptive cell transfer. These findings demonstrate that T-Ag–specific T cells are associated with the clinical outcome to PD-1 blockade and that Ag-presenting scaffolds can be used to boost such responses.

Authors

Ulla Kring Hansen, Candice D. Church, Ana Micaela Carnaz Simões, Marcus Svensson Frej, Amalie Kai Bentzen, Siri A. Tvingsholm, Jürgen C. Becker, Steven P. Fling, Nirasha Ramchurren, Suzanne L. Topalian, Paul T. Nghiem, Sine Reker Hadrup

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Figure 4

Individual marker expression before and after ICI therapy initiation.

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Individual marker expression before and after ICI therapy initiation.
(A...
(A and B) Expression of phenotypic markers before (A) and after ICI therapy initiation (B) for responders (blue) CD8+ T cells with T-Ag recognition (blue filled), with VP1+CEF recognition (gray filled) or unspecific bulk cells (open circle, blue outline); and nonresponders (red) CD8+ T cells with T-Ag–recognition (red filled), VP1+CEF recognition (gray filled), or unspecific bulk cells (open circle, red outline). *P < 0.05, Kruskal-Wallis test with Dunn’s correction. CM, central memory. (C) CD39 expression on T-Ag– or VP1+CEF-specific cells divided into the 3 time points tested: prior to ICI (0 weeks) and 3 weeks and 12 weeks after ICI initiation. Kruskal-Wallis test with Dunn’s correction. (D) Ki67 expression on T-Ag– or VP1+CEF-specific cells divided into the 3 time points tested. Kruskal-Wallis test with Dunn’s correction. (E) Percentage of double-positive for CD39 and Ki67 of T-Ag–specific, VP1+CEF-specific, or unspecific CD8+ T cells divided into the 3 time points tested. Kruskal-Wallis test with Dunn’s correction. All bars display the median and upper quartile. Ctrl, control.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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