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RNase L represses hair follicle regeneration through altered innate immune signaling
Charles S. Kirby, Nasif Islam, Eric Wier, Martin P. Alphonse, Evan Sweren, Gaofeng Wang, Haiyun Liu, Dongwon Kim, Ang Li, Sam S. Lee, Andrew M. Overmiller, Yingchao Xue, Sashank Reddy, Nathan K. Archer, Lloyd S. Miller, Jianshi Yu, Weiliang Huang, Jace W. Jones, Sooah Kim, Maureen A. Kane, Robert H. Silverman, Luis A. Garza
Charles S. Kirby, Nasif Islam, Eric Wier, Martin P. Alphonse, Evan Sweren, Gaofeng Wang, Haiyun Liu, Dongwon Kim, Ang Li, Sam S. Lee, Andrew M. Overmiller, Yingchao Xue, Sashank Reddy, Nathan K. Archer, Lloyd S. Miller, Jianshi Yu, Weiliang Huang, Jace W. Jones, Sooah Kim, Maureen A. Kane, Robert H. Silverman, Luis A. Garza
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Research Article Dermatology Inflammation

RNase L represses hair follicle regeneration through altered innate immune signaling

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Abstract

Mammalian injury responses are predominantly characterized by fibrosis and scarring rather than functional regeneration. This limited regenerative capacity in mammals could reflect a loss of proregeneration programs or active suppression by genes functioning akin to tumor suppressors. To uncover programs governing regeneration in mammals, we screened transcripts in human participants following laser rejuvenation treatment and compared them with mice with enhanced wound-induced hair neogenesis (WIHN), a rare example of mammalian organogenesis. We found that Rnasel–/– mice exhibit an increased regenerative capacity, with elevated WIHN through enhanced IL-36α. Consistent with RNase L’s known role to stimulate caspase-1, we found that pharmacologic inhibition of caspases promoted regeneration in an IL-36–dependent manner in multiple epithelial tissues. We identified a negative feedback loop, where RNase L–activated caspase-1 restrains the proregenerative dsRNA-TLR3 signaling cascade through the cleavage of toll-like adaptor protein TRIF. Through integrated single-cell RNA-seq and spatial transcriptomic profiling, we confirmed OAS & IL-36 genes to be highly expressed at the site of wounding and elevated in Rnasel–/– mouse wounds. This work suggests that RNase L functions as a regeneration repressor gene, in a functional trade off that tempers immune hyperactivation during viral infection at the cost of inhibiting regeneration.

Authors

Charles S. Kirby, Nasif Islam, Eric Wier, Martin P. Alphonse, Evan Sweren, Gaofeng Wang, Haiyun Liu, Dongwon Kim, Ang Li, Sam S. Lee, Andrew M. Overmiller, Yingchao Xue, Sashank Reddy, Nathan K. Archer, Lloyd S. Miller, Jianshi Yu, Weiliang Huang, Jace W. Jones, Sooah Kim, Maureen A. Kane, Robert H. Silverman, Luis A. Garza

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Figure 1

Transspecies dsRNA sensing signature during skin regeneration; RNase L represses regeneration markers.

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Transspecies dsRNA sensing signature during skin regeneration; RNase L r...
(A) 3-way Venn diagram shows a 14-gene overlap present in all of the top 200 genes in microarrays of in vivo WIHN comparing C57BL/6 × FVB × SJL mice (high regeneration strain) versus C57BL/6 mice (low regeneration strain) versus in vivo human clinical trial of participants treated with a rejuvenation laser, with in vitro human keratinocytes treated with dsRNA/Poly (I:C) as a positive control. The in vitro and in vivo human microarrays contain a total of 49,395 annotated transcripts each, and the in vivo murine microarray contains 53,145 transcripts. (B) Gene ontology analysis of each of the top 200 gene lists, highlighting the predominance of OAS family members in each data set. (C) Gene ontology terms enriched in the 14 overlapping genes from all 3 datasets include the upregulation of OAS family genes. Inset graphs show the gene fold-expression changes from the original microarray for genes present in that category; green and blue indicate mouse and human, respectively. (D) Analysis of the ribonuclease RNase L (downstream and activated by OAS), Venn diagram shows the top 200 overlapping genes in Rnasel–/– mice after wounding (at scab detachment) and human keratinocytes treated with siRNA targeting RNase L. GO categories include multiple developmental pathways. The in vivo microarray data contain 22,206 transcripts and the in vitro RNA-seq data contain 33,264 transcripts. (E–G) Poly (I:C) treatment (10 μg/mL) of RNase L siRNA transfected human keratinocytes induces multiple morphogenesis markers (E; n = 4, 2-way ANOVA, P < 0.05), including WNT7B (green) shown by immunostaining (original magnification, × 20) (F), but inhibits differentiation markers as measured by RT-PCR with fold changes compared with siCon without stimulation (G; n = 4, 2-way ANOVA, P < 0.05).

Copyright © 2026 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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