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Translational regulation of SND1 governs endothelial homeostasis during stress
Zhenbo Han, … , Soroush Tahmasebi, Sang-Ging Ong
Zhenbo Han, … , Soroush Tahmasebi, Sang-Ging Ong
Published February 3, 2025
Citation Information: J Clin Invest. 2025;135(3):e168730. https://doi.org/10.1172/JCI168730.
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Research Article Vascular biology

Translational regulation of SND1 governs endothelial homeostasis during stress

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Abstract

Translational control shapes the proteome and is particularly important in regulating gene expression under stress. A key source of endothelial stress is treatment with tyrosine kinase inhibitors (TKIs), which lowers cancer mortality but increases cardiovascular mortality. Using a human induced pluripotent stem cell–derived endothelial cell (hiPSC-EC) model of sunitinib-induced vascular dysfunction combined with ribosome profiling, we assessed the role of translational control in hiPSC-ECs in response to stress. We identified staphylococcal nuclease and tudor domain–containing protein 1 (SND1) as a sunitinib-dependent translationally repressed gene. SND1 translational repression was mediated by the mTORC1/4E-BP1 pathway. SND1 inhibition led to endothelial dysfunction, whereas SND1 OE protected against sunitinib-induced endothelial dysfunction. Mechanistically, SND1 transcriptionally regulated UBE2N, an E2-conjugating enzyme that mediates K63-linked ubiquitination. UBE2N along with the E3 ligases RNF8 and RNF168 regulated the DNA damage repair response pathway to mitigate the deleterious effects of sunitinib. In silico analysis of FDA-approved drugs led to the identification of an ACE inhibitor, ramipril, that protected against sunitinib-induced vascular dysfunction in vitro and in vivo, all while preserving the efficacy of cancer therapy. Our study established a central role for translational control of SND1 in sunitinib-induced endothelial dysfunction that could potentially be therapeutically targeted to reduce sunitinib-induced vascular toxicity.

Authors

Zhenbo Han, Gege Yan, Jordan Jousma, Sarath Babu Nukala, Mehdi Amiri, Stephen Kiniry, Negar Tabatabaei, Youjeong Kwon, Sen Zhang, Jalees Rehman, Sandra Pinho, Sang-Bing Ong, Pavel V. Baranov, Soroush Tahmasebi, Sang-Ging Ong

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Figure 5

SND1 regulates endothelial homeostasis via UBE2N.

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SND1 regulates endothelial homeostasis via UBE2N.
(A) Gene ontology (GO)...
(A) Gene ontology (GO) analysis of DEGs in RNA-Seq data obtained from hiPSC-ECs transduced with scramble shRNA or shSND1. Multiple ubiquitination-related processes were enriched among downregulated genes in SND1-KD hiPSC-ECs. (B) Immunoblot analysis confirmed that suppression of SND1 in hiPSC-ECs was associated with overall reduced levels of total ubiquitinated proteins. (C) RT-qPCR was performed on selected targets from RNA-Seq analysis to identify genes that were oppositely expressed in hiPSC-ECs after SND1 OE versus KD. n = 3 technical replicates. One-way ANOVA. Data are presented as mean ± SD. *P < 0.05, **P < 0.01, ***P < 0.001. (D) Immunoblotting demonstrating that UBE2N was reduced in shSND1 hiPSC-ECs and increased in SND1-OE hiPSC-ECs. (E) Co-IP analysis of the association between SND1 and UBE2N. (F) Effects of shUBE2N or UBE2N-OE on sunitinib-induced endothelial injury were determined by viability assay. One-way ANOVA. Data are presented as mean ± SD. ***P < 0.001. n = 9 replicates from the differentiation of 3 individual hiPSC lines. (G) Effects of shUBE2N or UBE2N OE on sunitinib-induced endothelial injury were determined by tube-formation assay. Scale bars: 220 μm. (H) Representative immunoblotting demonstrating that suppression of either SND1 or UBE2N led to downregulation of K63-linked polyubiquitination, while the overexpression of either SND1 or UBE2N led to upregulation of K63 in hiPSC-ECs. (I)Immunostaining of 53BP1 and γ-H2AX in hiPSC-ECs. DAPI was used for nuclear staining. Scale bars: 10 μm. One-way ANOVA. Data are presented as mean ± SD. *P < 0.05, **P < 0.01, ***P < 0.001. Blank+DMSO: 123 cells were quantified, n = 17 replicates. shUBE2N+DMSO: 151 cells were quantified, n = 26 replicates. UBE2N OE+DMSO: 143 cells were quantified, n = 19 replicates. Blank+sunitinib: 139 cells were quantified, n = 22 replicates. shUBE2N+sunitinib: 100 cells were quantified, n = 26 replicates. UBE2N OE+sunitinib: 131 cells were quantified, n = 23 replicates. (J) Cell viability assays showed that the protection conferred by UBE2N OE against sunitinib (SUN) was abrogated upon KD of RNF168 but not RNF8, HLTF, or SHPRH. One-way ANOVA. Data are presented as mean ± SD. ***P < 0.001. n = 9 replicates from the differentiation of 3 individual hiPSC lines. (K) Co-IP analysis of the association between UBE2N and RNF8 or RNF168. (L) hiPSC-ECs were transduced with blank vector, UBE2N OE, shScramble (CTL), shRNF8, shRNF168, shHLTF, or shSHPRH and then treated with DMSO or sunitinib, followed by immunostaining against 53BP1 and γ-H2AX. DAPI was used for nuclear staining. Scale bars: 5 μm.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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