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Epigenetic priming enhances antitumor immunity in platinum-resistant ovarian cancer
Siqi Chen, … , Bin Zhang, Daniela Matei
Siqi Chen, … , Bin Zhang, Daniela Matei
Published June 7, 2022
Citation Information: J Clin Invest. 2022;132(14):e158800. https://doi.org/10.1172/JCI158800.
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Clinical Research and Public Health Immunology Oncology

Epigenetic priming enhances antitumor immunity in platinum-resistant ovarian cancer

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Abstract

Background Immune checkpoint inhibitors (ICIs) have modest activity in ovarian cancer (OC). To augment their activity, we used priming with the hypomethylating agent guadecitabine in a phase II study.Methods Eligible patients had platinum-resistant OC, normal organ function, measurable disease, and received up to 5 prior regimens. The treatment included guadecitabine (30 mg/m2) on days 1–4, and pembrolizumab (200 mg i.v.) on day 5, every 21 days. The primary endpoint was the response rate. Tumor biopsies, plasma, and PBMCs were obtained at baseline and after treatment.Results Among 35 evaluable patients, 3 patients had partial responses (8.6%), and 8 (22.9%) patients had stable disease, resulting in a clinical benefit rate of 31.4% (95% CI: 16.9%–49.3%). The median duration of clinical benefit was 6.8 months. Long-interspersed element 1 (LINE1) was hypomethylated in post-treatment PBMCs, and methylomic and transcriptomic analyses showed activation of antitumor immunity in post-treatment biopsies. High-dimensional immune profiling of PBMCs showed a higher frequency of naive and/or central memory CD4+ T cells and of classical monocytes in patients with a durable clinical benefit or response (CBR). A higher baseline density of CD8+ T cells and CD20+ B cells and the presence of tertiary lymphoid structures in tumors were associated with a durable CBR.Conclusion Epigenetic priming using a hypomethylating agent with an ICI was feasible and resulted in a durable clinical benefit associated with immune responses in selected patients with recurrent OC.Trial registration ClinicalTrials.gov NCT02901899.Funding US Army Medical Research and Material Command/Congressionally Directed Medical Research Programs (USAMRMC/CDMRP) grant W81XWH-17-0141; the Diana Princess of Wales Endowed Professorship and LCCTRAC funds from the Robert H. Lurie Comprehensive Cancer Center; Walter S. and Lucienne Driskill Immunotherapy Research funds; Astex Pharmaceuticals; Merck & Co.; National Cancer Institute (NCI), NIH grants CCSG P30 CA060553, CCSG P30 CA060553, and CA060553.

Authors

Siqi Chen, Ping Xie, Matthew Cowan, Hao Huang, Horacio Cardenas, Russell Keathley, Edward J. Tanner, Gini F. Fleming, John W. Moroney, Alok Pant, Azza M. Akasha, Ramana V. Davuluri, Masha Kocherginsky, Bin Zhang, Daniela Matei

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Figure 3

Mass spectrometric identification of differences in subsets of PBMCs from patients with a durable CBR and nonresponders before treatment with G+P.

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Mass spectrometric identification of differences in subsets of PBMCs fro...
(A) Exemplified tSNE visualization of overlaid cell population composition in PBMCs from an initial cohort of nonresponders (n = 6) and durable CBR patients (n = 4) before the initiation of therapy (C1D1). (B) SPADE analysis of total immune cell populations in PBMCs from nonresponders (upper left) and durable CBR patients (upper right); as well as the subsets among total CD4+ T cells from nonresponders (lower left, n = 6) and durable CBR patients (lower right, n = 4) at C1D1. The size and color of each node correspond to the number of cells. (C) Left: CITRUS analysis showing a visual representation of unsupervised hierarchical clustering of CD4 cells and visualization of the clusters that were part of the significant results (in red). Right: Abundance plots for the significant cluster 2478 (of CD4 cells) in nonresponders (NR) and responders (CBR). (D) Heatmap represents the median expression levels of indicated markers within the cluster 2478 from nonresponders and responders (CBR).

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