[PDF][PDF] Genome-wide screens identify lineage-and tumor-specific genes modulating MHC-I-and MHC-II-restricted immunosurveillance of human lymphomas

D Dersh, JD Phelan, ME Gumina, B Wang, JH Arbuckle… - Immunity, 2021 - cell.com
D Dersh, JD Phelan, ME Gumina, B Wang, JH Arbuckle, J Holly, RJ Kishton, TE Markowitz
Immunity, 2021cell.com
Tumors frequently subvert major histocompatibility complex class I (MHC-I) peptide
presentation to evade CD8+ T cell immunosurveillance, though how this is accomplished is
not always well defined. To identify the global regulatory networks controlling antigen
presentation, we employed genome-wide screening in human diffuse large B cell
lymphomas (DLBCLs). This approach revealed dozens of genes that positively and
negatively modulate MHC-I cell surface expression. Validated genes clustered in multiple …
Summary
Tumors frequently subvert major histocompatibility complex class I (MHC-I) peptide presentation to evade CD8+ T cell immunosurveillance, though how this is accomplished is not always well defined. To identify the global regulatory networks controlling antigen presentation, we employed genome-wide screening in human diffuse large B cell lymphomas (DLBCLs). This approach revealed dozens of genes that positively and negatively modulate MHC-I cell surface expression. Validated genes clustered in multiple pathways including cytokine signaling, mRNA processing, endosomal trafficking, and protein metabolism. Genes can exhibit lymphoma subtype- or tumor-specific MHC-I regulation, and a majority of primary DLBCL tumors displayed genetic alterations in multiple regulators. We established SUGT1 as a major positive regulator of both MHC-I and MHC-II cell surface expression. Further, pharmacological inhibition of two negative regulators of antigen presentation, EZH2 and thymidylate synthase, enhanced DLBCL MHC-I presentation. These and other genes represent potential targets for manipulating MHC-I immunosurveillance in cancers, infectious diseases, and autoimmunity.
cell.com