[HTML][HTML] The sialoside-binding pocket of SARS-CoV-2 spike glycoprotein structurally resembles MERS-CoV

M Awasthi, S Gulati, DP Sarkar, S Tiwari, S Kateriya… - Viruses, 2020 - mdpi.com
M Awasthi, S Gulati, DP Sarkar, S Tiwari, S Kateriya, P Ranjan, SK Verma
Viruses, 2020mdpi.com
COVID-19 novel coronavirus (CoV) disease caused by severe acquired respiratory
syndrome (SARS)-CoV-2 manifests severe lethal respiratory illness in humans and has
recently developed into a worldwide pandemic. The lack of effective treatment strategy and
vaccines against the SARS-CoV-2 poses a threat to human health. An extremely high
infection rate and multi-organ secondary infection within a short period of time makes this
virus more deadly and challenging for therapeutic interventions. Despite high sequence …
COVID-19 novel coronavirus (CoV) disease caused by severe acquired respiratory syndrome (SARS)-CoV-2 manifests severe lethal respiratory illness in humans and has recently developed into a worldwide pandemic. The lack of effective treatment strategy and vaccines against the SARS-CoV-2 poses a threat to human health. An extremely high infection rate and multi-organ secondary infection within a short period of time makes this virus more deadly and challenging for therapeutic interventions. Despite high sequence similarity and utilization of common host-cell receptor, human angiotensin-converting enzyme-2 (ACE2) for virus entry, SARS-CoV-2 is much more infectious than SARS-CoV. Structure-based sequence comparison of the N-terminal domain (NTD) of the spike protein of Middle East respiratory syndrome (MERS)-CoV, SARS-CoV, and SARS-CoV-2 illustrate three divergent loop regions in SARS-CoV-2, which is reminiscent of MERS-CoV sialoside binding pockets. Comparative binding analysis with host sialosides revealed conformational flexibility of SARS-CoV-2 divergent loop regions to accommodate diverse glycan-rich sialosides. These key differences with SARS-CoV and similarity with MERS-CoV suggest an evolutionary adaptation of SARS-CoV-2 spike glycoprotein reciprocal interaction with host surface sialosides to infect host cells with wide tissue tropism.
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