RNA splicing regulates the temporal order of TNF-induced gene expression

S Hao, D Baltimore - … of the National Academy of Sciences, 2013 - National Acad Sciences
S Hao, D Baltimore
Proceedings of the National Academy of Sciences, 2013National Acad Sciences
When cells are induced to express inflammatory genes by treatment with TNF, the mRNAs
for the induced genes appear in three distinct waves, defining gene groups I, II, and III, or
early, intermediate, and late genes. To examine the basis for these different kinetic classes,
we have developed a PCR-based procedure to distinguish pre-mRNAs from mRNAs. It
shows that the three groups initiate transcription virtually simultaneously but that delays in
splicing characterize groups II and III. We also examined the elongation times, concluding …
When cells are induced to express inflammatory genes by treatment with TNF, the mRNAs for the induced genes appear in three distinct waves, defining gene groups I, II, and III, or early, intermediate, and late genes. To examine the basis for these different kinetic classes, we have developed a PCR-based procedure to distinguish pre-mRNAs from mRNAs. It shows that the three groups initiate transcription virtually simultaneously but that delays in splicing characterize groups II and III. We also examined the elongation times, concluding that pre-mRNA synthesis is coordinate but splicing differences directly regulate the timing of mRNA production.
National Acad Sciences