Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL

T Heinemeyer, E Wingender, I Reuter… - Nucleic acids …, 1998 - academic.oup.com
T Heinemeyer, E Wingender, I Reuter, H Hermjakob, AE Kel, OV Kel, EV Ignatieva…
Nucleic acids research, 1998academic.oup.com
Abstract TRANSFAC, TRRD (Transcription Regulatory Region Database) and COMPEL are
databases which store information about transcriptional regulation in eukaryotic cells. The
three databases provide distinct views on the components involved in transcription:
transcription factors and their binding sites and binding profiles (TRANSFAC), the regulatory
hierarchy of whole genes (TRRD), and the structural and functional properties of composite
elements (COMPEL). The quantitative and qualitative changes of all three databases and …
Abstract
TRANSFAC, TRRD (Transcription Regulatory Region Database) and COMPEL are databases which store information about transcriptional regulation in eukaryotic cells. The three databases provide distinct views on the components involved in transcription: transcription factors and their binding sites and binding profiles (TRANSFAC), the regulatory hierarchy of whole genes (TRRD), and the structural and functional properties of composite elements (COMPEL). The quantitative and qualitative changes of all three databases and connected programs are described. The databases are accessible via WWW: http://transfac.gbf.de/TRANSFAC or http://www.bionet.nsc.ru/TRRD
Oxford University Press