Structural interplay between germline interactions and adaptive recognition determines the bandwidth of TCR-peptide-MHC cross-reactivity

JJ Adams, S Narayanan, ME Birnbaum, SS Sidhu… - Nature …, 2016 - nature.com
JJ Adams, S Narayanan, ME Birnbaum, SS Sidhu, SJ Blevins, MH Gee, LV Sibener
Nature immunology, 2016nature.com
The T cell antigen receptor (TCR)–peptide–major histocompatibility complex (MHC)
interface is composed of conserved and diverse regions, yet the relative contribution of each
in shaping recognition by T cells remains unclear. Here we isolated cross-reactive peptides
with limited homology, which allowed us to compare the structural properties of nine
peptides for a single TCR-MHC pair. The TCR's cross-reactivity was rooted in highly similar
recognition of an apical'hot-spot'position in the peptide with tolerance of sequence variation …
Abstract
The T cell antigen receptor (TCR)–peptide–major histocompatibility complex (MHC) interface is composed of conserved and diverse regions, yet the relative contribution of each in shaping recognition by T cells remains unclear. Here we isolated cross-reactive peptides with limited homology, which allowed us to compare the structural properties of nine peptides for a single TCR-MHC pair. The TCR's cross-reactivity was rooted in highly similar recognition of an apical 'hot-spot' position in the peptide with tolerance of sequence variation at ancillary positions. Furthermore, we found a striking structural convergence onto a germline-mediated interaction between the TCR CDR1α region and the MHC α2 helix in twelve TCR-peptide-MHC complexes. Our studies suggest that TCR-MHC germline-mediated constraints, together with a focus on a small peptide hot spot, might place limits on peptide antigen cross-reactivity.
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