CDR3 loop flexibility contributes to the degeneracy of TCR recognition

JB Reiser, C Darnault, C Grégoire, T Mosser… - Nature …, 2003 - nature.com
JB Reiser, C Darnault, C Grégoire, T Mosser, G Mazza, A Kearney, PA van der Merwe
Nature immunology, 2003nature.com
T cell receptor (TCR) binding degeneracy lies at the heart of several physiological and
pathological phenomena, yet its structural basis is poorly understood. We determined the
crystal structure of a complex involving the BM3. 3 TCR and an octapeptide (VSV8) bound to
the H-2Kb major histocompatibility complex molecule at a 2.7 Å resolution, and compared it
with the BM3. 3 TCR bound to the H-2Kb molecule loaded with a peptide that has no primary
sequence identity with VSV8. Comparison of these structures showed that the BM3. 3 TCR …
Abstract
T cell receptor (TCR) binding degeneracy lies at the heart of several physiological and pathological phenomena, yet its structural basis is poorly understood. We determined the crystal structure of a complex involving the BM3.3 TCR and an octapeptide (VSV8) bound to the H-2Kb major histocompatibility complex molecule at a 2.7 Å resolution, and compared it with the BM3.3 TCR bound to the H-2Kb molecule loaded with a peptide that has no primary sequence identity with VSV8. Comparison of these structures showed that the BM3.3 TCR complementarity-determining region (CDR) 3α could undergo rearrangements to adapt to structurally different peptide residues. Therefore, CDR3 loop flexibility helps explain TCR binding cross-reactivity.
nature.com