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Pharmacological inhibition of the transcription factor PU.1 in leukemia
Iléana Antony-Debré, Ananya Paul, Joana Leite, Kelly Mitchell, Hye Mi Kim, Luis A. Carvajal, Tihomira I. Todorova, Kenneth Huang, Arvind Kumar, Abdelbasset A. Farahat, Boris Bartholdy, Swathi-Rao Narayanagari, Jiahao Chen, Alberto Ambesi-Impiombato, Adolfo A. Ferrando, Ioannis Mantzaris, Evripidis Gavathiotis, Amit Verma, Britta Will, David W. Boykin, W. David Wilson, Gregory M.K. Poon, Ulrich Steidl
Iléana Antony-Debré, Ananya Paul, Joana Leite, Kelly Mitchell, Hye Mi Kim, Luis A. Carvajal, Tihomira I. Todorova, Kenneth Huang, Arvind Kumar, Abdelbasset A. Farahat, Boris Bartholdy, Swathi-Rao Narayanagari, Jiahao Chen, Alberto Ambesi-Impiombato, Adolfo A. Ferrando, Ioannis Mantzaris, Evripidis Gavathiotis, Amit Verma, Britta Will, David W. Boykin, W. David Wilson, Gregory M.K. Poon, Ulrich Steidl
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Research Article Hematology

Pharmacological inhibition of the transcription factor PU.1 in leukemia

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Abstract

The transcription factor PU.1 is often impaired in patients with acute myeloid leukemia (AML). Here, we used AML cells that already had low PU.1 levels and further inhibited PU.1 using either RNA interference or, to our knowledge, first-in-class small-molecule inhibitors of PU.1 that we developed specifically to allosterically interfere with PU.1-chromatin binding through interaction with the DNA minor groove that flanks PU.1-binding motifs. These small molecules of the heterocyclic diamidine family disrupted the interaction of PU.1 with target gene promoters and led to downregulation of canonical PU.1 transcriptional targets. shRNA or small-molecule inhibition of PU.1 in AML cells from either PU.1lo mutant mice or human patients with AML-inhibited cell growth and clonogenicity and induced apoptosis. In murine and human AML (xeno)transplantation models, treatment with our PU.1 inhibitors decreased tumor burden and resulted in increased survival. Thus, our study provides proof of concept that PU.1 inhibition has potential as a therapeutic strategy for the treatment of AML and for the development of small-molecule inhibitors of PU.1.

Authors

Iléana Antony-Debré, Ananya Paul, Joana Leite, Kelly Mitchell, Hye Mi Kim, Luis A. Carvajal, Tihomira I. Todorova, Kenneth Huang, Arvind Kumar, Abdelbasset A. Farahat, Boris Bartholdy, Swathi-Rao Narayanagari, Jiahao Chen, Alberto Ambesi-Impiombato, Adolfo A. Ferrando, Ioannis Mantzaris, Evripidis Gavathiotis, Amit Verma, Britta Will, David W. Boykin, W. David Wilson, Gregory M.K. Poon, Ulrich Steidl

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Figure 1

PU.1 knockdown decreases cell growth and clonogenicity and increases apoptosis of murine and human AML cells.

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PU.1 knockdown decreases cell growth and clonogenicity and increases apo...
(A) Cell proliferation assay of PU.1 URE–/– AML (n = 4), MOLM13 (n = 3), Kasumi-1 (n = 3), and THP1 (n = 3) cells after transduction with shPU.1_1, shPU.1_2, or shPU.1_3. Results from 1 representative experiment are shown. (B) Clonogenic capacities of PU.1 URE–/– AML (n = 4), MOLM13 (n = 6), Kasumi-1 (n = 3), and THP1 (n = 4) cells after transduction with shPU.1_1, shPU.1_2, or shPU.1_3. Fold change compared with shCtrl is shown. (C) Apoptosis induction in PU.1 URE–/– AML (n = 3), MOLM13 (n = 7), Kasumi-1 (n = 3), and THP1 (n = 3) cells after transduction with shPU.1_1, shPU.1_2, or shPU.1_3. Fold change of annexin-V+DAPI– cells compared with shCtrl is shown. (D–F) Primary human AML cells were transduced with PU.1 shRNAs, sorted (GFP+), and plated in semisolid media; colony numbers and viable and apoptotic cell numbers were assessed after 14 days of culture. Error bars indicate the mean ± SD, and each AML sample is represented by an individual dot. The percentage (D and E) and fold change (F) compared with vehicle (dotted line) are shown. (D and E) Number of viable cells and clonogenic capacities and (F) apoptosis induction (annexin-V+DAPI–) after transduction with shPU.1_1 and shPU.1_2 (n = 7 each). *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001, by 1-way ANOVA.

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ISSN: 0021-9738 (print), 1558-8238 (online)

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