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Argonaute proteins are key determinants of RNAi efficacy, toxicity, and persistence in the adult mouse liver
Dirk Grimm, … , Theresa A. Storm, Mark A. Kay
Dirk Grimm, … , Theresa A. Storm, Mark A. Kay
Published August 9, 2010
Citation Information: J Clin Invest. 2010;120(9):3106-3119. https://doi.org/10.1172/JCI43565.
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Research Article Genetics

Argonaute proteins are key determinants of RNAi efficacy, toxicity, and persistence in the adult mouse liver

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Abstract

shRNA overexpression from viral gene therapy vectors can trigger cytotoxicity leading to organ failure and lethality in mice and rats. This process likely involves saturation of endogenous cellular RNAi factors including exportin-5 (Xpo-5). Here, we have shown that Xpo-5 overexpression enhanced shRNA efficiency in the liver of adult mice but increased hepatotoxicity. We identified the 4 members of the human Argonaute (Ago) protein family as downstream factors involved in saturation of endogenous cellular RNAi, all of which were able to interact with shRNAs in cells and mice. In Ago/shRNA coexpression studies, Ago-2 (Slicer) was the primary rate-limiting determinant of both in vitro and in vivo RNAi efficacy, toxicity, and persistence. In adult mice, vector-based Ago-2/Xpo-5 coexpression enhanced U6-driven shRNA silencing of exogenous and endogenous hepatic targets, reduced hepatotoxicity, and extended RNAi stability by more than 3 months. Use of weaker RNA polymerase III promoters to minimize shRNA expression likewise alleviated in vivo toxicity and permitted greater than 95% persistent knockdown of hepatitis B virus and other transgenes in mouse liver for more than 1 year. Our studies substantiate that abundant small RNAs can overload the endogenous RNAi pathway and reveal possible strategies for reducing hepatotoxicity of short- and long-term clinical gene silencing in humans.

Authors

Dirk Grimm, Lora Wang, Joyce S. Lee, Nina Schürmann, Shuo Gu, Kathleen Börner, Theresa A. Storm, Mark A. Kay

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Figure 1

Argonaute proteins are rate-limiting for shRNA in cells and mice.

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Argonaute proteins are rate-limiting for shRNA in cells and mice.
(A) AA...
(A) AAV vectors encoding human Xpo-5 cDNA under various promoters and resulting protein expression in transfected cells or murine livers. bghPA, bovine growth hormone polyadenylation signal; ITR, AAV replication/packaging signal; M, mock control. (B) In vivo Xpo-5 overexpression affects efficacy, toxicity and persistence of anti-hAAT shRNA (H25) in hAAT-transgenic mice (n = 3–6). Arrows indicate deaths of individual mice. (C) In vivo effects of preinfusion of Xpo-5–encoding vectors (n = 3). 1/8, AAV-1 or -8; F, human factor IX (control for anti–AAV-8 antibodies); H, H25 shRNA; X, Xpo-5. (D) In vitro screen to identify key RNAi factors limiting shRNA activity. 293 cells were cotransfected with hAAT plasmid, H25 shRNA, and the shown RNAi factors. *Codon-optimized Ago variants (see F). Data were normalized to a CMV-gfp control (Empty). (E) Effects of wild-type and optimized Ago overexpression in hydrodynamically transfected (hAAT, H25 shRNA, plus shown RNAi factors) mouse livers (n = 3, day 3). C, control; D, Dicer (representative example of an RNAi factor having no effect); Opt, codon-optimized; WT, wild-type Agos. For D and E, P < 0.01, Ago-2 versus controls. (F) Expression of different Ago cDNAs (top: Western blots; bottom: Northern blots) in transfected human cells. A, Ago; G, Gfp (expressed from plasmid control [C]). (G) Competition of wild-type and mutant Agos. They were cotransfected with hAAT and H25 shRNA plasmids, or additionally with 4-fold excess Ago-2 or -1. PIWI 3, Ago-3 Slicer mutant. N, N-terminal Ago domain; Mid, middle Ago domain. (H) Same in hydrodynamically transfected mice (n = 3–5, day 2). W, Ago-2 PIWI mutants (both gave similar results); Z, Ago-2 PAZ mutants. (I) Effects of Ago (codon-optimized Ago-3/4) overexpression on hAAT mRNA (H) cleavage with H25 shRNA in cotransfected cells (Northern blot).
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