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Cancer stem cells synthesize proline to attenuate oxidative stress
Weichi Wu, Po Zhang, Donghai Wang, Xujia Wu, Qiulian Wu, Daqi Li, Tengfei Huang, Rui Wang, Huan Li, Hailong Mi, Suchet Taori, Fanen Yuan, Tingting Duan, Zhiye Chen, Huairui Yuan, Jeremy N. Rich
Weichi Wu, Po Zhang, Donghai Wang, Xujia Wu, Qiulian Wu, Daqi Li, Tengfei Huang, Rui Wang, Huan Li, Hailong Mi, Suchet Taori, Fanen Yuan, Tingting Duan, Zhiye Chen, Huairui Yuan, Jeremy N. Rich
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Research Article Cell biology Metabolism Oncology

Cancer stem cells synthesize proline to attenuate oxidative stress

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Abstract

Cancers reprogram their metabolism to provide anabolic needs without driving excessive oxidative stress. Attention has focused on glucose metabolism, yet amino acid synthesis and degradation also promote tumor cell states and growth. Here, we assessed amino acids that maintain cancer stem cells in glioblastoma and found increased proline levels relative to differentiated tumor progeny through increased proline synthesis. Cancer stem cells preferentially expressed the signaling molecule FAM3C induced by the stem cell transcription factor SOX2 to drive expression of proline synthesis enzymes. FAM3C classically mediated cellular responses as a secreted protein but gained intracellular functions in cancer stem cells through binding the histone reader spindlin 1 (SPIN1), thereby preventing its lysosomal degradation, assisting its nuclear localization, and promoting epigenetic regulation of proline synthesis. Proline synthesis depleted ROS, and genetic targeting of FAM3C attenuated ROS scavenging, whereas SPIN1 OE restored ROS levels. Molecular docking identified tucatinib as a brain-penetrant pharmacologic disruptor of FAM3C-SPIN1 interactions, promoting SPIN1 degradation and reducing intracellular proline levels. Thus, cancer stem cells induced a favorable metabolic state through proline synthesis and ROS depletion, revealing potential therapeutic dependencies.

Authors

Weichi Wu, Po Zhang, Donghai Wang, Xujia Wu, Qiulian Wu, Daqi Li, Tengfei Huang, Rui Wang, Huan Li, Hailong Mi, Suchet Taori, Fanen Yuan, Tingting Duan, Zhiye Chen, Huairui Yuan, Jeremy N. Rich

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Figure 4

FAM3C interacts with SPIN1.

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FAM3C interacts with SPIN1.
(A) Volcano plot showing proteins that inter...
(A) Volcano plot showing proteins that interact with FAM3C in GSCs (GSC23) through proteomics data (FAM3C IP vs. IgG) (cutoff, |log2 (FC)| > 0.5, P < 0.05) (n = 2 biologically independent samples). Red dots indicate proteins enriched in GSCs and interacting with the FAM3C protein. (B) Immunoblot of FAM3C and SPIN1 protein immunoprecipitates in GSCs (GSC23 and GSC387). (C) Pie chart showing the genomic distribution of H3K4me3 peaks in GSC23 cells by H3K4me3 ChIP-seq (GSE185954). (D) Venn diagram showing 351 genes marked by H3K4me3 peaks that were downregulated following FAM3C KD. (E) KEGG pathway analysis of genes identified in D ranked by P value. (F) H3K4me3 ChIP-seq tracks at ALDH18A1 (P5CS), PYCR1, and PYCR2 gene loci (GSE211725). (G and H) qRT-PCR analysis of key enzymes in proline synthesis in GSC23 (G) and GSC387 (H) GSCS with or without SPIN1 KD (n = 3 independent experiments). Data are presented as the mean ± SD. Statistical analysis was determined by 2-way ANOVA followed by a multiple-comparison test. (I) Immunoblot analysis of key enzymes in proline synthesis in GSCs (GSC23 and GSC387) with or without SPIN1 KD. (J) Immunoblot analysis of SPIN1 in GSCs (GSC23 and GSC387) with or without FAM3C KD. (K) Immunoblot analysis of nuclear and cytoplasmic fractions of GSCs (GSC23 and GSC387) with or without FAM3C KD. (L) HEK-293 cells were cotransfected with FLAG-tagged FAM3C and either MYC-tagged full-length SPIN1 or a MYC-tagged C-terminal deletion mutant of SPIN1 (MYC-SPIN1-ΔC23-term). Cell lysates were subjected to IP using an anti-FLAG antibody. The resulting precipitates and corresponding whole-cell lysates (input) were analyzed by Western blotting using antibodies against the MYC-tag, FLAG-tag, and FAM3C.

Copyright © 2026 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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