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Inflammation- and resolution-programmed myeloid circuits govern therapeutic resistance in epithelial and mesenchymal triple-negative breast cancer
Liqun Yu, Charlotte Rivas, Fengshuo Liu, Yichao Shen, Ling Wu, Zhan Xu, Yunfeng Ding, Xiaoxin Hao, Weijie Zhang, Hilda L. Chan, Jun Liu, Bo Wei, Yang Gao, Luis Becerra-Dominguez, Yi-Hsuan Wu, Siyue Wang, Tobie D. Lee, Xuan Li, Xiang Chen, David G. Edwards, Xiang H.-F. Zhang
Liqun Yu, Charlotte Rivas, Fengshuo Liu, Yichao Shen, Ling Wu, Zhan Xu, Yunfeng Ding, Xiaoxin Hao, Weijie Zhang, Hilda L. Chan, Jun Liu, Bo Wei, Yang Gao, Luis Becerra-Dominguez, Yi-Hsuan Wu, Siyue Wang, Tobie D. Lee, Xuan Li, Xiang Chen, David G. Edwards, Xiang H.-F. Zhang
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Research Article Immunology Oncology

Inflammation- and resolution-programmed myeloid circuits govern therapeutic resistance in epithelial and mesenchymal triple-negative breast cancer

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Abstract

Single-cell analysis of human triple-negative breast cancer revealed heterogeneous macrophage populations with opposing phenotypes — proinflammatory and proresolution of inflammation. Paradoxically, both subsets accumulated in therapy-refractory residual tumors but showed inverse correlations across patients, suggesting mutually exclusive resistance mechanisms. Inflammatory macrophages localized preferentially to epithelial-like tumors, whereas proresolution macrophages were enriched in mesenchymal-like tumors. Mouse models faithfully recapitulated these patterns. After chemoimmunotherapy, mesenchymal-like tumors expanded proresolution macrophages through phagocytosis/efferocytosis, ω-3 fatty acid uptake, and resolvin production. Macrophage-secreted C1q emerged as a principal antagonist of T cell function by targeting mitochondria and inducing metabolic dysfunction. By contrast, epithelial-like tumors accumulated inflammatory macrophages and neutrophils that produced prostaglandins via ω-6 fatty acid pathways. Knocking down ELOVL5 — an elongase involved in ω-3 and ω-6 metabolism — mitigated both neutrophil- and macrophage-mediated immunosuppression. These distinct axes, driven by dysregulated inflammation and resolution programs, converged to undermine therapy-induced immunosurveillance; however, targeting their shared upstream regulators may overcome these resistance mechanisms.

Authors

Liqun Yu, Charlotte Rivas, Fengshuo Liu, Yichao Shen, Ling Wu, Zhan Xu, Yunfeng Ding, Xiaoxin Hao, Weijie Zhang, Hilda L. Chan, Jun Liu, Bo Wei, Yang Gao, Luis Becerra-Dominguez, Yi-Hsuan Wu, Siyue Wang, Tobie D. Lee, Xuan Li, Xiang Chen, David G. Edwards, Xiang H.-F. Zhang

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Figure 5

Efferocytosis and resolvin production promote inflammation resolution macrophage differentiation.

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Efferocytosis and resolvin production promote inflammation resolution ma...
(A) Representative immunofluorescence of F4/80, CFSE (left), RFP (right), and DAPI in macrophages cocultured with paclitaxel-treated (PTX-treated) E0771-Res1 (left) or AT3-Res RFP (right) cells. Scale bar: 50 μm; 10 μm (zoomed-in). (B) Flow cytometry (left) and quantification of TREM2 expression in RFPlo versus RFPhi macrophages after coculture with PTX-treated, RFP-labeled E0771-Res1 (middle, n = 6), or GFPlo versus GFPhi macrophages after coculture with PTX-treated, GFP-labeled AT3-Res cells (right, n = 5). (C) Lipidomic comparison of DHA- and EPA-containing lipids in resistant versus parental E0771 cells (n = 3). Lipids with absolute log2 fold change > 0.5 and P < 0.05 were included. (D) Relative expression of murine cluster 0 macrophage-specific genes in bone marrow–derived macrophages (BMDMs, n = 3) treated with M-CSF (5 or 10 ng/mL) alone or M-CSF (5 ng/mL) plus resolvin D1 (RvD1), resolvin E1 (RvE1), or lipoxin A4 (LXA4, 30 ng/mL). BMDMs treated with M-CSF (5 ng/mL) alone served as baseline control. (E) ELISA quantification of RvD1 in BMDMs cocultured with RFP-labeled, PTX-treated E0771 (n = 4), E0771-Res1 (n = 3), and E0771-Res2 cells (n = 3). Macrophages were sorted by RFP signal. Macrophage cultured alone (n = 4) served as baseline control. (F) Representative immunofluorescence of RFP, TREM2, and DAPI in E0771-Res1 tumors. Arrowheads highlight engulfed RFP debris. Scale bar: 50 μm; 10 μm (zoomed-in). (G) Flow cytometry plots (left) and quantification of TREM2 expression in RFPhi (middle) and RFPlo (right) tumor-associated macrophages (TAMs) from RFP-labeled E0771, E0771-Res1, and E0771-Res2 tumors (n = 4). (H) Relative expression of murine cluster 0 macrophage-specific genes in TAMs from GFP-labeled AT3-Res tumors (n = 4). (I) ELISA analysis of RvD1 in TAMs from E0771, E0771-Res1, and E0771-Res2 tumors (n = 3). (D, E, G, and I) Significance was determined using 1-way ANOVA followed by Tukey’s test. (B and H) Significance was calculated using paired 2-tailed t test. *P < 0.05, **P < 0.005, ***P < 0.001.

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