Airway epithelial gene expression in the diagnostic evaluation of smokers with suspect lung cancer

A Spira, JE Beane, V Shah, K Steiling, G Liu… - Nature medicine, 2007 - nature.com
A Spira, JE Beane, V Shah, K Steiling, G Liu, F Schembri, S Gilman, YM Dumas, P Calner…
Nature medicine, 2007nature.com
Lung cancer is the leading cause of death from cancer in the US and the world. The high
mortality rate (80–85% within 5 years) results, in part, from a lack of effective tools to
diagnose the disease at an early stage,,. Given that cigarette smoke creates a field of injury
throughout the airway,,,,,,, we sought to determine if gene expression in histologically normal
large-airway epithelial cells obtained at bronchoscopy from smokers with suspicion of lung
cancer could be used as a lung cancer biomarker. Using a training set (n= 77) and gene …
Abstract
Lung cancer is the leading cause of death from cancer in the US and the world. The high mortality rate (80–85% within 5 years) results, in part, from a lack of effective tools to diagnose the disease at an early stage,,. Given that cigarette smoke creates a field of injury throughout the airway,,,,,,, we sought to determine if gene expression in histologically normal large-airway epithelial cells obtained at bronchoscopy from smokers with suspicion of lung cancer could be used as a lung cancer biomarker. Using a training set (n = 77) and gene-expression profiles from Affymetrix HG-U133A microarrays, we identified an 80-gene biomarker that distinguishes smokers with and without lung cancer. We tested the biomarker on an independent test set (n = 52), with an accuracy of 83% (80% sensitive, 84% specific), and on an additional validation set independently obtained from five medical centers (n = 35). Our biomarker had ∼90% sensitivity for stage 1 cancer across all subjects. Combining cytopathology of lower airway cells obtained at bronchoscopy with the biomarker yielded 95% sensitivity and a 95% negative predictive value. These findings indicate that gene expression in cytologically normal large-airway epithelial cells can serve as a lung cancer biomarker, potentially owing to a cancer-specific airway-wide response to cigarette smoke.
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