Rules for α-helix termination by glycine

R Aurora, R Srinivasan, GD Rose - Science, 1994 - science.org
Science, 1994science.org
A predictive rule for protein folding is presented that involves two recurrent glycine-based
motifs that cap the carboxyl termini of α helices. In proteins, helices that terminated in glycine
residues were found predominantly in one of these two motifs. These glycine structures had
a characteristic pattern of polar and apolar residues. Visual inspection of known helical
sequences was sufficient to distinguish the two motifs from each other and from internal
glycines that fail to terminate helices. These glycine motifs—in which the local sequence …
A predictive rule for protein folding is presented that involves two recurrent glycine-based motifs that cap the carboxyl termini of α helices. In proteins, helices that terminated in glycine residues were found predominantly in one of these two motifs. These glycine structures had a characteristic pattern of polar and apolar residues. Visual inspection of known helical sequences was sufficient to distinguish the two motifs from each other and from internal glycines that fail to terminate helices. These glycine motifs—in which the local sequence selects between available structures—represent an example of a stereochemical rule for protein folding.
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