Mayday-a microarray data analysis workbench

J Dietzsch, N Gehlenborg, K Nieselt - Bioinformatics, 2006 - academic.oup.com
J Dietzsch, N Gehlenborg, K Nieselt
Bioinformatics, 2006academic.oup.com
Mayday is a workbench for visualization, analysis and storage of microarray data. It features
a graphical user interface and supports the development and integration of existing and new
analysis methods. Besides the infrastructural core functionality, Mayday offers a variety of
plug-ins, such as various interactive viewers, a connection to the R statistical environment, a
connection to SQL-based databases and different data mining methods, including WEKA-
library based methods for classification and various clustering methods. In addition, so …
Abstract
Mayday is a workbench for visualization, analysis and storage of microarray data. It features a graphical user interface and supports the development and integration of existing and new analysis methods. Besides the infrastructural core functionality, Mayday offers a variety of plug-ins, such as various interactive viewers, a connection to the R statistical environment, a connection to SQL-based databases and different data mining methods, including WEKA-library based methods for classification and various clustering methods. In addition, so-called meta information objects are provided for annotation of the microarray data allowing integration of data from different sources, which is a feature that, for instance, is employed in the enhanced heatmap visualization.
Contact:  nieselt@informatik.uni-tuebingen.de
Supplementary information: The software and more detailed information including screenshots and a user guide as well as test data can be found on the Mayday home page . The core is published under the GPL (GNU Public License) and the associated plug-ins under the LGPL (Lesser GNU Public License).
Oxford University Press