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Thomas Boettger, Nadine Beetz, Sawa Kostin, Johanna Schneider, Marcus Krüger, Lutz Hein, Thomas Braun
Published in Volume 119, Issue 9
J Clin Invest. 2009; 119(9):2634–2647 doi:10.1172/JCI38864
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Figure 1
Microarray analysis of miR-143/145 expression and targeting strategy of the miR-143/145 cluster.

(A) miRNA microarray analysis of different mouse tissues. Expression values are ratios of tissue-specific miRNA expression versus reference miRNA from an E15.5 mouse embryo. The miRNAs show a similar expression profile in different organs. The miR-1/133a cluster, miR-124/miR-9, and miR-122 are known markers of heart/muscle, brain, and liver, respectively. mmu, Mus musculus. (B) The miR-143 and miR-145 sequences are separated by a 1.3-kb fragment on mouse chromosome 18. Both miRNAs were deleted by insertion of an IRES-lacZ-NeoR cassette. EcoRV restriction fragments used for genotyping are indicated. (C) Southern blot analysis of WT, heterozygous, and KO animals using the 5ι outside probe and EcoRV-digested genomic DNA. (D) Microarray analysis of miRNA expression of a WT versus KO aorta. Results of 2 microarray experiments with dye swapping for WT and KO mice are shown. The arrays were normalized to a ratio of medians of one for the let-7 signals, and the results of the 2 experiments were combined by calculating the mean of signals after reversion of all ratios (1/x) of the dye swap control experiment. miR-143 and miR-145 are shown in red; other miRNAs of the aorta are in blue. (E) Northern blot analysis of miRNA expression in WT and KO tissues. Blots were probed with radioactively labeled U6/miR-143 and U6/miR-145, respectively.