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Anna M.G. Pasmooij, Hendri H. Pas, Maria C. Bolling, Marcel F. Jonkman
Published in Volume 117, Issue 5
J Clin Invest. 2007; 117(5):1240–1248 doi:10.1172/JCI30465
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Figure 5
Effects of second-site mutations at the mRNA level (patient 078-01).

(A) nt 580–848 of LAMB3 mRNA was analyzed by RT-PCR. Along with the expected 269-bp product in the control sample (lane 1), affected skin samples revealed 3 smaller transcripts (lanes 2 and 3). Isolation and sequencing showed the presence of normally spliced transcript (B, b), the exon 7–deleted transcript (c), a transcript missing the first 2 nt of exon 8 in addition to exon 7 (d), and a transcript with a deletion of 165 nt, comprising exon 7 and the first 101 nt of exon 8 (e), in biopsy I (M) (lane 2) and biopsy II (M) (lane 3). In the mosaic biopsy III (R) (lane 4), the normally spliced variant was more abundant, whereas the amount of aberrant mRNA transcripts was decreased. In the completely reverted biopsy IV (R), an additional transcript retaining the first 66 nt of intron 7 (B, a) was present (lane 5). (C) The LAMB3 gene, with sizes of exons (above) and introns (below). Splicing of normal full-length transcript is indicated with the solid line (C, b). Dotted lines depict the splicing of aberrant transcripts (C, a, c, d, and e). The mutations c.628G→A and c.628G+42G→A are indicated by black arrowheads. (D) p.R635X induces exon 14 skipping. Primers amplifying bp 1,641–2,229 demonstrated the 589-nt transcript in the control (lane 1). This fragment was almost absent in all patient biopsies (lanes 2–5), while a smaller amplimer of 210 bp was visualized. Lane M contains a 100-bp molecular size marker (A and D).