Jci_page_head_homepage_01 Jci_page_head_homepage_02
Karin Jurkat-Rott, Frank Lehmann-Horn
Published in Volume 115, Issue 8
J Clin Invest. 2005; 115(8):2000–2009 doi:10.1172/JCI25525
Abstract | Full text | PDF
Options: View larger image (or click on image)
Medium
Figure 6

Proposed number of control chromosomes. A statistical algorithm helps to calculate the number of controls required to minimize the error. Let the prevalence of a mutation in patient chromosomes be p1 and the prevalence in control chromosomes be p0. Then the probability of an arbitrary control chromosome not carrying the mutation is (1 – p0). Because the world control population is large, the probability P of arbitrarily choosing n chromosomes thereof without the mutation may be approximated by P = (1 – p0)n. The null hypothesis would be that the mutation frequency is equal in patient and control chromosomes, i.e., p0 = p1 and P = (1 – p1)n. The number of control chromosomes to be tested can be calculated by resolution of the equation for the number n = ln(P)/ln(1 – p1). When the error probability P is set at 1%, the number of required control chromosomes is n = –4.6/ln(1 – p1) and n = 460 for the example of p1 = 1%. The curve demonstrates that 100 control individuals (200 chromosomes) would be adequate for a p1 of 2.5%, a prevalence that is much higher than that of the most frequent monogenic disorder. Adapted with permission from Neurology (90).