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Jenelle M. Timmins, Ji-Young Lee, Elena Boudyguina, Kimberly D. Kluckman, Liam R. Brunham, Anny Mulya, Abraham K. Gebre, Jonathan M. Coutinho, Perry L. Colvin, Thomas L. Smith, Michael R. Hayden, Nobuyo Maeda, John S. Parks
Published in Volume 115, Issue 5
J Clin Invest. 2005; 115(5):1333–1342 doi:10.1172/JCI23915
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Figure 1

Targeting strategy and genotypic analysis of liver-specific Abca1-knockout mice. (A) Schematic of 3′ region (exons 44–49) of Abca1 gene showing wild-type (top), floxed (middle), and knockout (bottom) Abca1 alleles. Three loxP sites, 2 flanking the neomycin (Neo) resistance gene and 1 in intron 46, are shown as arrowheads. Arrows below the floxed allele indicate relative position of primers used for PCR screen of alleles. The size of the EcoRV (RV) fragment is shown above each allele, and the relative location of the probe used for Southern blot analysis is shown above the wild-type allele (Probe A). Cre recombinase–mediated elimination of exons 45 and 46 will delete the second ATP-binding cassette, resulting in a knockout allele. Restriction sites: Bg2, Bgl II; E, EcoRI; H, HindIII; S, SacI. (B) Southern blot analysis of liver (L) and kidney (K) genomic DNA from mice that inherited both the Cre and wild-type or floxed Abca1 alleles. DNA was digested with EcoRV and hybridized with probe A. –L denotes a liver-specific knockout allele. (C) Quantitative real-time PCR analysis of RNA isolated from liver and kidney. Relative fold change compared with a wild-type (+/+) liver sample was calculated using the 2–ØØCT method (42). (D) Western blot analysis of liver membranes isolated from 3 mice of the indicated Abca1 genotypes. (E) Multi-tissue Southern blot of genomic DNA from the indicated tissues from a wild-type and liver-specific knockout (–L/–L) mouse.